Gene: AT5G63800 (Arabidopsis thaliana)

Overview

Gene Identifier
AT5G63800
Transcript Identifier
AT5G63800.1
Gene Type
Coding gene
Location
5 : 25530323-25535678 : positive

Family

Gene family
HOM03D000192
(309 genes in 16 species)
specific family
Subfamily
ORTHO03D000027
(75 genes in 16 species)
specific family

Loading...please wait

Descriptions

Description
Glycosyl hydrolase family 35 protein
Curated Summary
Involved in mucilage formation. Mutants form columella and outer cell wall architecture of the mucilage cells resembles wild-type. However, mum2 seeds completely lack seed coat mucilage. This mutation appears to represent a later step in the development of this cell-type. Encodes a beta-galactosidase involved in seed coat mucilage biosynthesis. Member of Glycoside Hydrolase Family 35
Show more...

Identifiers

Identifier Name
aliasMUCILAGE-MODIFIED 2
aliasBGAL6
aliasMUM2
aliasbeta-galactosidase 6
uniprotQ9FFN4

Toolbox

Explore

View

 

Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009827IMPUniProtplant-type cell wall modification1 2 3 4
GO:0048354IMPUniProtmucilage biosynthetic process involved in seed coat development1 2 3 4
GO:0005975IEAUniProtcarbohydrate metabolic process1 2 3
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000138
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000138
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000138

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004565IDA, ISS, UniProtbeta-galactosidase activity1 2 3 4
GO:0003824IEAInterProcatalytic activity
GO:0004553IEAInterProhydrolase activity, hydrolyzing O-glycosyl compounds
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000138
GO:0016798IEAPLAZA Homologyhydrolase activity, acting on glycosyl bondsHOM03D000138
GO:0030246IEAPLAZA Homologycarbohydrate bindingHOM03D000138

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region
GO:0005618IDAUniProtcell wall1 2 3 4
GO:0048046IDAUniProtapoplast1 2 3 4

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
Show redundant parents:  
 
InterPro Description
IPR008979Galactose-binding domain-like
IPR001944Glycoside hydrolase, family 35
IPR019801Glycoside hydrolase, family 35, conserved site
IPR017853Glycoside hydrolase, superfamily
IPR013781Glycoside hydrolase, catalytic domain
Mapman id Description
26.3.2misc.gluco-, galacto- and mannosidases.beta-galactosidase
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network