PLAZA Gymnosperms gene overview : AT5G50850

Gene: AT5G50850 (Arabidopsis thaliana)

Overview

Gene Identifier: AT5G50850
Transcript Identifier: AT5G50850.1
Gene Type: Coding gene
Location: 5 : 20689671-20692976 : positive

Family

Gene family: HOM03D000954
(96 genes in 16 species)
specific family
Subfamily: ORTHO03D001558
(21 genes in 16 species)
specific family

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Descriptions

Description: Transketolase family protein

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Identifiers

Identifier	Name
alias	MAB1
alias	MACCI-BOU
uniprot	Q38799

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

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Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0042742	IEP	UniProt	defense response to bacterium	1 2 3 4 5
GO:0006096	IEA, RCA	UniProt	glycolysis	1 2 3 4 5
GO:0009060	RCA	Gene Ontology	aerobic respiration	1
GO:0009744	RCA	Gene Ontology	response to sucrose	1
GO:0009749	RCA	Gene Ontology	response to glucose	1
GO:0009750	RCA	Gene Ontology	response to fructose	1
GO:0019722	RCA	Gene Ontology	calcium-mediated signaling	1
GO:0046686	RCA	Gene Ontology	response to cadmium ion	1
GO:0008152	IEA	InterPro	metabolic process
GO:0006086	IEA	UniProt	acetyl-CoA biosynthetic process from pyruvate	1 2 3 4

Molecular Function

GO term	Evidence(s)	Provider	Description	Source
GO:0004739	IEA, ISS	UniProt	pyruvate dehydrogenase (acetyl-transferring) activity	1 2 3 4
GO:0003824	IEA	InterPro	catalytic activity

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005739	IDA, ISM,	UniProt	mitochondrion	1 2 3 4 5
GO:0005730	IDA	UniProt	nucleolus	1 2 3 4 5
GO:0005774	IDA	UniProt	vacuolar membrane	1 2 3 4 5
GO:0005829	RCA	Gene Ontology	cytosol	1
GO:0048046	IDA	UniProt	apoplast	1 2 3 4 5
GO:0005794	RCA	Gene Ontology	Golgi apparatus	1
GO:0005759	IEA	UniProt	mitochondrial matrix	1 2 3 4

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

InterPro	Description
IPR009014	Transketolase, C-terminal/Pyruvate-ferredoxin oxidoreductase, domain II
IPR005475	Transketolase-like, pyrimidine-binding domain
IPR005476	Transketolase, C-terminal
IPR027110	Pyruvate dehydrogenase E1 component subunit beta

Mapman id	Description
8.1.1.1	TCA / org transformation.TCA.pyruvate DH.E1

No SignalP domains detected for this gene.