Gene: AT5G30510 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G30510
- Transcript Identifier
- AT5G30510.1
- Gene Type
- Coding gene
- Location
- 5 : 11619262-11621223 : negative
Family
- Gene family
Identifiers
| Identifier | Name |
|---|---|
| alias | ribosomal protein S1 |
| alias | ARRPS1 |
| alias | RPS1 |
| alias | plastid ribosomal protein S1 |
| alias | PRPS1 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
View
Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0006098 | RCA | Gene Ontology | pentose-phosphate shunt | 1 |
| GO:0006364 | RCA | Gene Ontology | rRNA processing | 1 |
| GO:0009773 | RCA | Gene Ontology | photosynthetic electron transport in photosystem I | 1 |
| GO:0009902 | RCA | Gene Ontology | chloroplast relocation | 1 |
| GO:0010027 | RCA | Gene Ontology | thylakoid membrane organization | 1 |
| GO:0015995 | RCA | Gene Ontology | chlorophyll biosynthetic process | 1 |
| GO:0019288 | RCA | Gene Ontology | isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway | 1 |
| GO:0034660 | RCA | Gene Ontology | ncRNA metabolic process | 1 |
| GO:0006412 | IEA | PLAZA Homology | translation | HOM03D004229 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0003723 | ISS, IEA | Gene Ontology | RNA binding | |
| GO:0003735 | IEA | PLAZA Homology | structural constituent of ribosome | HOM03D004229 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005739 | ISM | Gene Ontology | mitochondrion | |
| GO:0009507 | IDA | Gene Ontology | chloroplast | 1 |
| GO:0009579 | IDA | Gene Ontology | thylakoid | 1 |
| GO:0016020 | IDA | Gene Ontology | membrane | 1 |
| GO:0009570 | IDA | Gene Ontology | chloroplast stroma | 1 |
| GO:0005840 | IEA | PLAZA Homology | ribosome | HOM03D004229 |
Color Legend
| Computational Reviewed Evidence |
| Electronic Evidence |
| Experimental Evidence |
| Mapman id | Description |
|---|---|
| 29.2.1.1.3.1.1 | protein.synthesis.ribosomal protein.prokaryotic.unknown organellar.30S subunit.S1 |
No SignalP domains detected for this gene.
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench