Gene: AT5G16570 (Arabidopsis thaliana)
Overview 
- Gene Identifier
- AT5G16570
- Transcript Identifier
- AT5G16570.1
- Gene Type
- Coding gene
- Location
- 5 : 5421898-5424523 : negative
Family
- Gene family
- Subfamily
Descriptions
- Description
-
glutamine synthetase 1;4
- Curated Summary
-
Encodes a cytosolic glutamine synthetase, the enzyme has high affinity with substrate ammonium
Identifiers
| Identifier | Name |
|---|---|
| alias | glutamine synthetase 1;4 |
| alias | GLN1;4 |
| uniprot | Q9FMD9 |
Toolbox
Explore
- ...the colinearity of this gene with other genomes.
- ...the local gene organization for homologous genes.
- ...the phylogenetic tree of the homologous gene family.
- ...the orthologs using the Integrative Orthology Viewer.
- ...the conserved binding sites (upstream/downstream,intron)
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Biological Process
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0042128 | TAS | UniProt | nitrate assimilation | 1 2 3 4 5 |
| GO:0009744 | RCA | Gene Ontology | response to sucrose | 1 |
| GO:0009749 | RCA | Gene Ontology | response to glucose | 1 |
| GO:0009750 | RCA | Gene Ontology | response to fructose | 1 |
| GO:0006807 | IEA | InterPro | nitrogen compound metabolic process | |
| GO:0006542 | IEA | UniProt | glutamine biosynthetic process | 1 2 3 4 |
| GO:0009399 | IEA | UniProt | nitrogen fixation | 1 2 3 4 |
| GO:0010150 | ISO | PLAZA Tree-based Orthology | leaf senescence | AT5G37600 |
| GO:0009651 | ISO | PLAZA Tree-based Orthology | response to salt stress | AT1G66200 |
| GO:0009084 | IEA | PLAZA Homology | glutamine family amino acid biosynthetic process | HOM03D000796 |
| GO:0009064 | IEA | PLAZA Homology | glutamine family amino acid metabolic process | HOM03D000796 |
| GO:1901607 | IEA | PLAZA Homology | alpha-amino acid biosynthetic process | HOM03D000796 |
| GO:0008652 | IEA | PLAZA Homology | cellular amino acid biosynthetic process | HOM03D000796 |
| GO:0006541 | IEA | PLAZA Homology | glutamine metabolic process | HOM03D000796 |
Molecular Function
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0004356 | IDA, ISSIEA, | UniProt | glutamate-ammonia ligase activity | 1 2 3 4 5 |
| GO:0003824 | IEA | InterPro | catalytic activity | |
| GO:0005524 | IEA | UniProt | ATP binding | 1 2 3 4 |
| GO:0005515 | ISO | PLAZA Tree-based Orthology | protein binding | AT5G37600 |
| GO:0005507 | ISO | PLAZA Tree-based Orthology | copper ion binding | AT1G66200 AT5G37600 |
| GO:0016880 | IEA | PLAZA Homology | acid-ammonia (or amide) ligase activity | HOM03D000796 |
| GO:0016879 | IEA | PLAZA Homology | ligase activity, forming carbon-nitrogen bonds | HOM03D000796 |
| GO:0016211 | IEA | PLAZA Homology | ammonia ligase activity | HOM03D000796 |
Cellular Component
| GO term | Evidence(s) | Provider | Description | Source |
|---|---|---|---|---|
| GO:0005737 | ISM | Gene Ontology | cytoplasm | |
| GO:0005829 | NAS | UniProt | cytosol | 1 2 3 4 5 |
| GO:0009506 | ISO | PLAZA Tree-based Orthology | plasmodesma | AT5G37600 |
| GO:0005886 | ISO | PLAZA Tree-based Orthology | plasma membrane | AT5G37600 |
| GO:0005618 | ISO | PLAZA Tree-based Orthology | cell wall | AT5G37600 |
| GO:0009570 | ISO | PLAZA Tree-based Orthology | chloroplast stroma | AT1G66200 |
| GO:0048046 | ISO | PLAZA Tree-based Orthology | apoplast | AT1G66200 |
| GO:0022626 | ISO | PLAZA Tree-based Orthology | cytosolic ribosome | AT1G66200 AT5G37600 |
| GO:0005773 | ISO | PLAZA Tree-based Orthology | vacuole | AT1G66200 |
| GO:0009941 | ISO | PLAZA Tree-based Orthology | chloroplast envelope | AT1G66200 |
Color Legend
| Computational Reviewed Evidence |
| Electronic Evidence |
| Experimental Evidence |
| Mapman id | Description |
|---|---|
| 12.2.2 | N-metabolism.ammonia metabolism.glutamine synthetase |
No SignalP domains detected for this gene.
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