Gene: AT5G07420 (Arabidopsis thaliana)

Overview

Gene Identifier
AT5G07420
Transcript Identifier
AT5G07420.1
Gene Type
Coding gene
Location
5 : 2349547-2351366 : positive

Family

Gene family
HOM03D000037
(1072 genes in 16 species)
specific family

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Descriptions

Description
Pectin lyase-like superfamily protein
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Identifiers

Identifier Name
uniprotQ9LY18

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009827RCAGene Ontologyplant-type cell wall modification1
GO:0009860RCAGene Ontologypollen tube growth1
GO:0042545IEAUniProtcell wall modification1 2 3 4
GO:0045490IEAUniProtpectin catabolic process1 2 3 4
GO:0009987IEAPLAZA Homologycellular processHOM03D000030
GO:0045229IEAPLAZA Homologyexternal encapsulating structure organizationHOM03D000030
GO:0071555IEAPLAZA Homologycell wall organizationHOM03D000030
GO:0071554IEAPLAZA Homologycell wall organization or biogenesisHOM03D000030
GO:0071840IEAPLAZA Homologycellular component organization or biogenesisHOM03D000030
GO:0016043IEAPLAZA Homologycellular component organizationHOM03D000030

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0030599IEA, ISSUniProtpectinesterase activity1 2 3 4
GO:0045330IEAUniProtaspartyl esterase activity1 2 3 4
GO:0004857IEAPLAZA Homologyenzyme inhibitor activityHOM03D000030
GO:0052689IEAPLAZA Homologycarboxylic ester hydrolase activityHOM03D000030
GO:0016788IEAPLAZA Homologyhydrolase activity, acting on ester bondsHOM03D000030
GO:0003824IEAPLAZA Homologycatalytic activityHOM03D000030
GO:0016787IEAPLAZA Homologyhydrolase activityHOM03D000030
GO:0030234IEAPLAZA Homologyenzyme regulator activityHOM03D000030

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576IEA, ISMUniProtextracellular region1 2 3 4
GO:0009505ISSGene Ontologyplant-type cell wall
GO:0005618IEAUniProtcell wall1 2 3 4
GO:0030312IEAPLAZA Homologyexternal encapsulating structureHOM03D000030
GO:0005623IEAPLAZA HomologycellHOM03D000030
GO:0071944IEAPLAZA Homologycell peripheryHOM03D000030
GO:0044464IEAPLAZA Homologycell partHOM03D000030

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR012334Pectin lyase fold
IPR011050Pectin lyase fold/virulence factor
IPR000070Pectinesterase, catalytic
Mapman id Description
10.8.1cell wall.pectin*esterases.PME
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network