Gene: AT4G03050 (Arabidopsis thaliana)

Overview

Gene Identifier
AT4G03050
Transcript Identifier
AT4G03050.2
Gene Type
Coding gene
Location
4 : 1344332-1346127 : positive

Family

Gene family
HOM03D000012
(2144 genes in 16 species)
specific family

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Descriptions

Description
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curated Summary
Transcriptional silent in leaf tissues of ecotype Col. The transcribed allele in ecotype Ler encodes a 2-oxoglutarate-dependent dioxygenase which is involved in glucosinolate biosynthesis. The natural variation in this locus explains the diversification of hydroxyalkyl glucosinolates among different ecotypes of Arabidopsis.
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Identifiers

Identifier Name
aliasAOP3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0019761IMPGene Ontologyglucosinolate biosynthetic process1
GO:0055114IEAInterProoxidation-reduction process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016706IDA, IEAGene Ontologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors1
GO:0005506IEAInterProiron ion binding
GO:0016491IEAInterProoxidoreductase activity
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03D000223
GO:0016705IEAPLAZA Homologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenHOM03D000223

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005737ISMGene Ontologycytoplasm
GO:0016020ISOPLAZA Tree-based OrthologymembraneAT4G03070

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002283Isopenicillin N synthase
IPR005123Oxoglutarate/iron-dependent dioxygenase
IPR027443Isopenicillin N synthase-like
Mapman id Description
16.5.1.1.1.11secondary metabolism.sulfur-containing.glucosinolates.synthesis.aliphatic.glucosinolate 2-oxoglutarate-dependent dioxygenase (AOP)
No SignalP domains detected for this gene.