Gene: AT3G28490 (Arabidopsis thaliana)

Overview

Gene Identifier
AT3G28490
Transcript Identifier
AT3G28490.1
Gene Type
Coding gene
Location
3 : 10679150-10680654 : negative

Family

Gene family
HOM03D000410
(178 genes in 16 species)
specific family
Subfamily
ORTHO03D004392
(17 genes in 15 species)
specific family

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Descriptions

Description
Oxoglutarate/iron-dependent oxygenase
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Identifiers

Identifier Name

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0018401ISSGene Ontologypeptidyl-proline hydroxylation to 4-hydroxy-L-proline
GO:0009827RCAGene Ontologyplant-type cell wall modification1
GO:0009860RCAGene Ontologypollen tube growth1
GO:0055114IEAInterProoxidation-reduction process
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000319

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016706ISS, IEAGene Ontologyoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031418IEAInterProL-ascorbic acid binding
GO:0005506IEAInterProiron ion binding
GO:0016491IEAInterProoxidoreductase activity
GO:0016705IEAInterProoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0031406IEAPLAZA Homologycarboxylic acid bindingHOM03D000319
GO:0043177IEAPLAZA Homologyorganic acid bindingHOM03D000319
GO:0043168IEAPLAZA Homologyanion bindingHOM03D000319
GO:0043169IEAPLAZA Homologycation bindingHOM03D000319
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000319
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03D000319
GO:0019842IEAPLAZA Homologyvitamin bindingHOM03D000319
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000319
GO:0030246IEAPLAZA Homologycarbohydrate bindingHOM03D000319
GO:0048029IEAPLAZA Homologymonosaccharide bindingHOM03D000319

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR005123Oxoglutarate/iron-dependent dioxygenase
IPR006620Prolyl 4-hydroxylase, alpha subunit
IPR003582ShKT domain
Mapman id Description
26.7misc.oxidases - copper, flavone etc
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network