Gene: AT3G12060 (Arabidopsis thaliana)

Overview

Gene Identifier
AT3G12060
Transcript Identifier
AT3G12060.1
Gene Type
Coding gene
Location
3 : 3843142-3845150 : positive

Family

Gene family
HOM03D000060
(779 genes in 16 species)
specific family

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Descriptions

Description
Plant protein of unknown function (DUF828)
Curated Summary
Encodes a member of the TBL (TRICHOME BIREFRINGENCE-LIKE) gene family containing a plant-specific DUF231 (domain of unknown function) domain. TBL gene family has 46 members, two of which (TBR/AT5G06700 and TBL3/AT5G01360) have been shown to be involved in the synthesis and deposition of secondary wall cellulose, presumably by influencing the esterification state of pectic polymers. A nomenclature for this gene family has been proposed (Volker Bischoff & Wolf Scheible, 2010, personal communication).
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Identifiers

Identifier Name
aliasTRICHOME BIREFRINGENCE-LIKE 1
aliasTBL1

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030244IMPGene Ontologycellulose biosynthetic process1
GO:0007129RCAGene Ontologysynapsis1
GO:0007131RCAGene Ontologyreciprocal meiotic recombination1
GO:0045489ISOPLAZA Tree-based Orthologypectin biosynthetic processAT5G06700
GO:0009827ISOPLAZA Tree-based Orthologyplant-type cell wall modificationAT5G06700
GO:0009834ISOPLAZA Tree-based Orthologysecondary cell wall biogenesisAT5G06700

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005802ISOPLAZA Tree-based Orthologytrans-Golgi networkAT5G06700
GO:0005794ISOPLAZA Tree-based OrthologyGolgi apparatusAT5G06700
GO:0005768ISOPLAZA Tree-based OrthologyendosomeAT5G06700

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Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR026057PC-Esterase
IPR025846PMR5 N-terminal domain
Mapman id Description
35.2not assigned.unknown
No SignalP domains detected for this gene.