Gene: AT3G06060 (Arabidopsis thaliana)

Overview

Gene Identifier
AT3G06060
Transcript Identifier
AT3G06060.1
Gene Type
Coding gene
Location
3 : 1828296-1830160 : negative

Family

Gene family
HOM03D000305
(215 genes in 16 species)
specific family
Subfamily
ORTHO03D003364
(18 genes in 16 species)
specific family

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Descriptions

Description
NAD(P)-binding Rossmann-fold superfamily protein
Curated Summary
Encodes one of the Arabidopsis proteins (At3g06060/TSC10A and At5g19200/TSC10B) with significant similarity to the yeast 3-ketodihydrosphinganine (3-KDS) reductase, Tsc10p. Both TSC10A and TSC10B are bona fide 3-KDS reductase as shown by complementation experiment in yeast.
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Identifiers

Identifier Name
aliasTSC10A

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0030148IMPGene Ontologysphingolipid biosynthetic process1
GO:0008152IEAInterPrometabolic process

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016491ISS, IEAGene Ontologyoxidoreductase activity
GO:0047560IDAGene Ontology3-dehydrosphinganine reductase activity1

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507ISMGene Ontologychloroplast
GO:0005789IDAGene Ontologyendoplasmic reticulum membrane1

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002347Glucose/ribitol dehydrogenase
IPR020904Short-chain dehydrogenase/reductase, conserved site
IPR016040NAD(P)-binding domain
IPR002198Short-chain dehydrogenase/reductase SDR
Mapman id Description
11.8.1lipid metabolism.exotics (steroids, squalene etc).sphingolipids
No SignalP domains detected for this gene.