Gene: AT2G20650 (Arabidopsis thaliana)

Overview

Gene Identifier
AT2G20650
Transcript Identifier
AT2G20650.1
Gene Type
Coding gene
Location
2 : 8903954-8907017 : negative

Family

Gene family
HOM03D006077
(22 genes in 13 species)
specific family
Subfamily
ORTHO03D003501
(18 genes in 13 species)
specific family

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Descriptions

Description
RING/U-box superfamily protein
Curated Summary
Encodes a putative RING E3 ubiquitin ligase based on its 84.5% amino acid identity with FLY1, which possesses this activity in vitro. It is predicted to be localized to the endomembrane system based on protein topology.
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Identifiers

Identifier Name
aliasFLYING SAUCER 2
aliasFLY2

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009827ISSGene Ontologyplant-type cell wall modification1
GO:0080001ISOPLAZA Tree-based Orthologymucilage extrusion from seed coatAT4G28370
GO:0048363ISOPLAZA Tree-based Orthologymucilage pectin metabolic processAT4G28370

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0008270ISS, IEAGene Ontologyzinc ion binding
GO:0004842ISSGene Ontologyubiquitin-protein ligase activity1
GO:0005515IEAInterProprotein binding

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005886ISMGene Ontologyplasma membrane
GO:0012505ISOPLAZA Tree-based Orthologyendomembrane systemAT4G28370

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001841Zinc finger, RING-type
IPR013083Zinc finger, RING/FYVE/PHD-type
Mapman id Description
29.5.11.4.2protein.degradation.ubiquitin.E3.RING
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network