Gene: AT1G77980 (Arabidopsis thaliana)

Overview

Gene Identifier
AT1G77980
Transcript Identifier
AT1G77980.1
Gene Type
Coding gene
Location
1 : 29315212-29317067 : negative

Family

Gene family
HOM03D000048
(929 genes in 16 species)
specific family
Subfamily
ORTHO03D031611
(3 genes in 2 species)
specific family

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Descriptions

Description
AGAMOUS-like 66
Curated Summary
Encodes a member of the MIKC (MADS box, Keratin binding domain, and C terminal domain containing )family of transcriptional regulators. AGL66 is expressed in pollen.It forms heterodimers with other MICK family members (AGL104). Involved in late stages of pollen development and pollen tube growth.
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Identifiers

Identifier Name
aliasAGAMOUS-like 66
aliasAGL66

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006355TASGene Ontologyregulation of transcription, DNA-dependent1
GO:0009555IGI, IMPGene Ontologypollen development1 2
GO:0009827RCAGene Ontologyplant-type cell wall modification1
GO:0009860RCAGene Ontologypollen tube growth1
GO:0010584RCAGene Ontologypollen exine formation1
GO:0010468IEAPLAZA Homologyregulation of gene expressionHOM03D000038
GO:0010467IEAPLAZA Homologygene expressionHOM03D000038
GO:0006807IEAPLAZA Homologynitrogen compound metabolic processHOM03D000038
GO:0051252IEAPLAZA Homologyregulation of RNA metabolic processHOM03D000038
GO:0051171IEAPLAZA Homologyregulation of nitrogen compound metabolic processHOM03D000038
GO:0044260IEAPLAZA Homologycellular macromolecule metabolic processHOM03D000038
GO:0019222IEAPLAZA Homologyregulation of metabolic processHOM03D000038
GO:0019219IEAPLAZA Homologyregulation of nucleobase-containing compound metabolic processHOM03D000038
GO:0034641IEAPLAZA Homologycellular nitrogen compound metabolic processHOM03D000038
GO:0034645IEAPLAZA Homologycellular macromolecule biosynthetic processHOM03D000038
GO:0050789IEAPLAZA Homologyregulation of biological processHOM03D000038
GO:0009889IEAPLAZA Homologyregulation of biosynthetic processHOM03D000038
GO:0018130IEAPLAZA Homologyheterocycle biosynthetic processHOM03D000038
GO:0043170IEAPLAZA Homologymacromolecule metabolic processHOM03D000038
GO:0019438IEAPLAZA Homologyaromatic compound biosynthetic processHOM03D000038
GO:0046483IEAPLAZA Homologyheterocycle metabolic processHOM03D000038
GO:0016070IEAPLAZA HomologyRNA metabolic processHOM03D000038
GO:0009987IEAPLAZA Homologycellular processHOM03D000038
GO:0044271IEAPLAZA Homologycellular nitrogen compound biosynthetic processHOM03D000038
GO:0065007IEAPLAZA Homologybiological regulationHOM03D000038
GO:0010556IEAPLAZA Homologyregulation of macromolecule biosynthetic processHOM03D000038
GO:0006139IEAPLAZA Homologynucleobase-containing compound metabolic processHOM03D000038
GO:0032774IEAPLAZA HomologyRNA biosynthetic processHOM03D000038
GO:0006725IEAPLAZA Homologycellular aromatic compound metabolic processHOM03D000038
GO:1901576IEAPLAZA Homologyorganic substance biosynthetic processHOM03D000038
GO:0090304IEAPLAZA Homologynucleic acid metabolic processHOM03D000038
GO:0080090IEAPLAZA Homologyregulation of primary metabolic processHOM03D000038
GO:2001141IEAPLAZA Homologyregulation of RNA biosynthetic processHOM03D000038
GO:0044237IEAPLAZA Homologycellular metabolic processHOM03D000038
GO:0044238IEAPLAZA Homologyprimary metabolic processHOM03D000038
GO:0009058IEAPLAZA Homologybiosynthetic processHOM03D000038
GO:0009059IEAPLAZA Homologymacromolecule biosynthetic processHOM03D000038
GO:0060255IEAPLAZA Homologyregulation of macromolecule metabolic processHOM03D000038
GO:0006351IEAPLAZA Homologytranscription, DNA-templatedHOM03D000038
GO:2000112IEAPLAZA Homologyregulation of cellular macromolecule biosynthetic processHOM03D000038
GO:0031323IEAPLAZA Homologyregulation of cellular metabolic processHOM03D000038
GO:0031326IEAPLAZA Homologyregulation of cellular biosynthetic processHOM03D000038
GO:1901360IEAPLAZA Homologyorganic cyclic compound metabolic processHOM03D000038
GO:1901362IEAPLAZA Homologyorganic cyclic compound biosynthetic processHOM03D000038
GO:0034654IEAPLAZA Homologynucleobase-containing compound biosynthetic processHOM03D000038
GO:0050794IEAPLAZA Homologyregulation of cellular processHOM03D000038
GO:0008152IEAPLAZA Homologymetabolic processHOM03D000038
GO:0071704IEAPLAZA Homologyorganic substance metabolic processHOM03D000038
GO:0044249IEAPLAZA Homologycellular biosynthetic processHOM03D000038

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISSGene Ontologysequence-specific DNA binding transcription factor activity1
GO:0046983IEAInterProprotein dimerization activity
GO:0003677IEAInterProDNA binding
GO:0005515IEAPLAZA Homologyprotein bindingHOM03D000038
GO:0097159IEAPLAZA Homologyorganic cyclic compound bindingHOM03D000038
GO:0003676IEAPLAZA Homologynucleic acid bindingHOM03D000038
GO:0005488IEAPLAZA HomologybindingHOM03D000038
GO:1901363IEAPLAZA Homologyheterocyclic compound bindingHOM03D000038
GO:0001071IEAPLAZA Homologynucleic acid binding transcription factor activityHOM03D000038

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus
GO:0043231IEAPLAZA Homologyintracellular membrane-bounded organelleHOM03D000038
GO:0005622IEAPLAZA HomologyintracellularHOM03D000038
GO:0043226IEAPLAZA HomologyorganelleHOM03D000038
GO:0043227IEAPLAZA Homologymembrane-bounded organelleHOM03D000038
GO:0043229IEAPLAZA Homologyintracellular organelleHOM03D000038
GO:0044464IEAPLAZA Homologycell partHOM03D000038
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000038
GO:0005623IEAPLAZA HomologycellHOM03D000038

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR002100Transcription factor, MADS-box
Mapman id Description
27.3.24RNA.regulation of transcription.MADS box transcription factor family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBMADS
PlantTFDBMIKC