Gene: AT1G69670 (Arabidopsis thaliana)

Overview

Gene Identifier
AT1G69670
Transcript Identifier
AT1G69670.1
Gene Type
Coding gene
Location
1 : 26202169-26204442 : negative

Family

Gene family
HOM03D000143
(405 genes in 16 species)
specific family
Subfamily
ORTHO03D000808
(24 genes in 13 species)
specific family

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Descriptions

Description
cullin 3B
Curated Summary
cullin, putative, contains similarity to Cullin homolog 3 (CUL-3) SP:Q13618, GI:3639052 from (Homo sapiens); contains Pfam profile PF00888: Cullin family. Interacts with members of AtBPM family and RBX1 suggesting it is part of an E3 ligase complex involved in RUB modification.
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Identifiers

Identifier Name
aliasATCUL3B
aliascullin 3B
aliasCUL3B
aliasARABIDOPSIS THALIANA CULLIN 3B
uniprotQ9C9L0

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0006511IEA, TASUniProtubiquitin-dependent protein catabolic process1 2 3 4 5 6 7 8
GO:0009793IGI, RCA, UniProtembryo development ending in seed dormancy1 2 3 4 5 6 7 8 9
GO:0009960IGIUniProtendosperm development1 2 3 4 5 6 7 8
GO:0000911RCAGene Ontologycytokinesis by cell plate formation1
GO:0007062RCAGene Ontologysister chromatid cohesion1
GO:0007155RCAGene Ontologycell adhesion1
GO:0009880RCAGene Ontologyembryonic pattern specification1
GO:0010072RCAGene Ontologyprimary shoot apical meristem specification1
GO:0010090RCAGene Ontologytrichome morphogenesis1
GO:0010228RCAGene Ontologyvegetative to reproductive phase transition of meristem1
GO:0010413RCAGene Ontologyglucuronoxylan metabolic process1
GO:0010431RCAGene Ontologyseed maturation1
GO:0045010RCAGene Ontologyactin nucleation1
GO:0045492RCAGene Ontologyxylan biosynthetic process1
GO:0045595RCAGene Ontologyregulation of cell differentiation1
GO:0048765RCAGene Ontologyroot hair cell differentiation1
GO:0051301RCAGene Ontologycell division1
GO:0071555RCAGene Ontologycell wall organization1
GO:0016567IEAUniProtprotein ubiquitination1 2 3 4 5 6 7
GO:0044265IEAPLAZA Homologycellular macromolecule catabolic processHOM03D000287
GO:1901575IEAPLAZA Homologyorganic substance catabolic processHOM03D000287
GO:0030163IEAPLAZA Homologyprotein catabolic processHOM03D000287
GO:0051603IEAPLAZA Homologyproteolysis involved in cellular protein catabolic processHOM03D000287
GO:0019941IEAPLAZA Homologymodification-dependent protein catabolic processHOM03D000287
GO:0006508IEAPLAZA HomologyproteolysisHOM03D000287
GO:0044257IEAPLAZA Homologycellular protein catabolic processHOM03D000287
GO:0009056IEAPLAZA Homologycatabolic processHOM03D000287
GO:0009057IEAPLAZA Homologymacromolecule catabolic processHOM03D000287
GO:0043632IEAPLAZA Homologymodification-dependent macromolecule catabolic processHOM03D000287
GO:0044248IEAPLAZA Homologycellular catabolic processHOM03D000287
GO:0044267IEAPLAZA Homologycellular protein metabolic processHOM03D000287
GO:0019538IEAPLAZA Homologyprotein metabolic processHOM03D000287
GO:0009639ISOPLAZA Integrative Orthologyresponse to red or far red lightAT1G26830
GO:0009911ISOPLAZA Integrative Orthologypositive regulation of flower developmentAT1G26830

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0004842ISSGene Ontologyubiquitin-protein ligase activity
GO:0005515IPIGene Ontologyprotein binding1
GO:0031625IEAInterProubiquitin protein ligase binding
GO:0044389IEAPLAZA Homologysmall conjugating protein ligase bindingHOM03D000287
GO:0019899IEAPLAZA Homologyenzyme bindingHOM03D000287

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634ISMGene Ontologynucleus
GO:0000151TASGene Ontologyubiquitin ligase complex1
GO:0019005IPIGene OntologySCF ubiquitin ligase complex1
GO:0031461IEAUniProtcullin-RING ubiquitin ligase complex1 2 3 4 5 6 7
GO:0005622IEAPLAZA HomologyintracellularHOM03D000287
GO:0032991IEAPLAZA Homologymacromolecular complexHOM03D000287
GO:1902494IEAPLAZA Homologycatalytic complexHOM03D000287
GO:0043234IEAPLAZA Homologyprotein complexHOM03D000287
GO:0044424IEAPLAZA Homologyintracellular partHOM03D000287
GO:0005829ISOPLAZA Integrative OrthologycytosolAT1G26830

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Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011991Winged helix-turn-helix DNA-binding domain
IPR019559Cullin protein, neddylation domain
IPR016158Cullin homology
IPR001373Cullin, N-terminal
IPR016159Cullin repeat-like-containing domain
Mapman id Description
29.5.11.4.5.1protein.degradation.ubiquitin.E3.BTB/POZ Cullin3.Cullin3
No SignalP domains detected for this gene.