Gene: AT1G69180 (Arabidopsis thaliana)

Overview

Gene Identifier
AT1G69180
Transcript Identifier
AT1G69180.1
Gene Type
Coding gene
Location
1 : 26007734-26008940 : negative

Family

Gene family
HOM03D001219
(80 genes in 15 species)
specific family
Subfamily
ORTHO03D032709
(3 genes in 3 species)
specific family

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Descriptions

Description
Plant-specific transcription factor YABBY family protein
Curated Summary
Putative transcription factor with zinc finger and helix-loop-helix domains, the later similar to HMG boxes. Involved in specifying abaxial cell fate in the carpel. Four putative LFY binding sites (CCANTG) and two potential binding sites for MADS box proteins known as CArG boxes (CC(A/T)6GG) were found in the region spanning 3.8 Kb upstream of the CRC coding region.
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Identifiers

Identifier Name
aliasCRC
aliasCRABS CLAW
uniprotQ8L925

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0010254IMPUniProtnectary development1 2 3 4 5 6 7 8 9
GO:0048440IMP, RCAGene Ontologycarpel development1 2
GO:0006355TASGene Ontologyregulation of transcription, DNA-dependent1
GO:0009944TASUniProtpolarity specification of adaxial/abaxial axis1 2 3 4 5 6 7 8 9
GO:0010582IGIUniProtfloral meristem determinacy1 2 3 4 5 6 7 8 9
GO:0048479IMPUniProtstyle development1 2 3 4 5 6 7 8 9
GO:0006333RCAGene Ontologychromatin assembly or disassembly1
GO:0009827RCAGene Ontologyplant-type cell wall modification1
GO:0009860RCAGene Ontologypollen tube growth1
GO:0009886RCAGene Ontologypost-embryonic morphogenesis1
GO:0009909RCAGene Ontologyregulation of flower development1
GO:0010093RCAGene Ontologyspecification of floral organ identity1
GO:0031540RCAGene Ontologyregulation of anthocyanin biosynthetic process1
GO:0048441RCAGene Ontologypetal development1
GO:0048443RCAGene Ontologystamen development1
GO:0048481RCAGene Ontologyovule development1
GO:0048507RCAGene Ontologymeristem development1
GO:0030154IEAUniProtcell differentiation1 2 3 4 5 6 7 8
GO:0006351IEAUniProttranscription, DNA-templated1 2 3 4 5 6 7 8

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0003700ISS, TAS, UniProtsequence-specific DNA binding transcription factor activity1 AGRICOLA_IND:IND232652092 3 4 5 6 7 8 9 10
GO:0003677IEAUniProtDNA binding1 2 3 4 5 6 7 8
GO:0046872IEAUniProtmetal ion binding1 2 3 4 5 6 7 8

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005634IEA, ISMUniProtnucleus1 2 3 4 5 6 7 8

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR009071High mobility group box domain
IPR006780YABBY protein
Mapman id Description
27.3.10RNA.regulation of transcription.C2C2(Zn) YABBY family
No SignalP domains detected for this gene.
DatabaseType
PlnTFDBC2C2-YABBY
PlantTFDBYABBY