Gene: AT1G67560 (Arabidopsis thaliana)

Overview

Gene Identifier
AT1G67560
Transcript Identifier
AT1G67560.1
Gene Type
Coding gene
Location
1 : 25319926-25324117 : positive

Family

Gene family
HOM03D000128
(450 genes in 16 species)
specific family
Subfamily
ORTHO03D000009
(108 genes in 16 species)
specific family

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Descriptions

Description
PLAT/LH2 domain-containing lipoxygenase family protein
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Identifiers

Identifier Name
aliasArabidopsis thaliana lipoxygenase 6
aliasATLOX6
aliaslipoxygenase 6
aliasLOX6
uniprotQ9CAG3

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0040007ISSGene Ontologygrowth
GO:0034440IDAUniProtlipid oxidation1 2 3 4 5
GO:0009611RCAGene Ontologyresponse to wounding1
GO:0009695IMP, RCA, UniProtjasmonic acid biosynthetic process1 2 3 4 5 6
GO:0055114IEAInterProoxidation-reduction process
GO:0031408IEAUniProtoxylipin biosynthetic process1 2 3 4
GO:0051707ISOPLAZA Integrative Orthologyresponse to other organismOS08G39840 AT3G45140 OS03G52860
GO:0009414ISOPLAZA Integrative Orthologyresponse to water deprivationAT3G45140
GO:0009617ISOPLAZA Integrative Orthologyresponse to bacteriumAT3G45140 AT1G72520
GO:0009620ISOPLAZA Integrative Orthologyresponse to fungusAT3G45140 AT1G17420
GO:0009753ISOPLAZA Integrative Orthologyresponse to jasmonic acidAT3G45140 AT1G55020 AT1G17420
GO:0080027ISOPLAZA Integrative Orthologyresponse to herbivoreAT3G45140
GO:1900366ISOPLAZA Integrative Orthologynegative regulation of defense response to insectAT3G22400
GO:0048364ISOPLAZA Integrative Orthologyroot developmentAT3G22400 AT1G55020
GO:0010311ISOPLAZA Integrative Orthologylateral root formationAT3G22400 AT1G55020
GO:0006952ISOPLAZA Integrative Orthologydefense responseAT1G72520 AT1G55020 AT1G17420
GO:0080086ISOPLAZA Integrative Orthologystamen filament developmentAT1G72520 AT1G17420
GO:0009901ISOPLAZA Integrative Orthologyanther dehiscenceAT1G72520 AT1G17420
GO:0048653ISOPLAZA Integrative Orthologyanther developmentAT1G72520 AT1G17420
GO:0009555ISOPLAZA Integrative Orthologypollen developmentAT1G72520 AT1G17420
GO:0010193ISOPLAZA Integrative Orthologyresponse to ozoneAT1G72520
GO:0009816ISOPLAZA Integrative Orthologydefense response to bacterium, incompatible interactionAT1G55020
GO:0030397ISOPLAZA Integrative Orthologymembrane disassemblyAT1G55020
GO:0009737ISOPLAZA Integrative Orthologyresponse to abscisic acidAT1G55020
GO:0009644ISOPLAZA Integrative Orthologyresponse to high light intensityAT1G17420
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000170
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000170

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0016165IDA, IEA, UniProtlinoleate 13S-lipoxygenase activity1 2 3 4 5
GO:0005515IEAInterProprotein binding
GO:0005506IEAUniProtiron ion binding1 2 3 4
GO:0016702IEAInterProoxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872IEAInterPrometal ion binding
GO:0016166ISOPLAZA Integrative Orthologyphytoene dehydrogenase activityOS08G39840
GO:1990136ISOPLAZA Integrative Orthologylinoleate 9S-lipoxygenase activityAT3G22400 AT1G55020
GO:0043169IEAPLAZA Homologycation bindingHOM03D000170
GO:0043167IEAPLAZA Homologyion bindingHOM03D000170
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000170
GO:0051213IEAPLAZA Homologydioxygenase activityHOM03D000170
GO:0016491IEAPLAZA Homologyoxidoreductase activityHOM03D000170
GO:0016701IEAPLAZA Homologyoxidoreductase activity, acting on single donors with incorporation of molecular oxygenHOM03D000170

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0009507IDA, ISM, UniProtchloroplast1 2 3 4 5
GO:0005886IDAUniProtplasma membrane1 2 3 4 5
GO:0009570ISOPLAZA Integrative Orthologychloroplast stromaAT3G45140
GO:0009941ISOPLAZA Integrative Orthologychloroplast envelopeAT3G45140
GO:0009535ISOPLAZA Integrative Orthologychloroplast thylakoid membraneAT3G45140

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR001246Lipoxygenase, plant
IPR000907Lipoxygenase
IPR013819Lipoxygenase, C-terminal
IPR027433Lipoxygenase, domain 3
IPR001024PLAT/LH2 domain
IPR020834Lipoxygenase, conserved site
IPR008976Lipase/lipooxygenase, PLAT/LH2
IPR020833Lipoxygenase, iron binding site
Mapman id Description
17.7.1.2hormone metabolism.jasmonate.synthesis-degradation.lipoxygenase
No SignalP domains detected for this gene.