Gene: AT1G55560 (Arabidopsis thaliana)

Overview

Gene Identifier
AT1G55560
Transcript Identifier
AT1G55560.1
Gene Type
Coding gene
Location
1 : 20754474-20756527 : negative

Family

Gene family
HOM03D000238
(260 genes in 16 species)
specific family
Subfamily
ORTHO03D000024
(79 genes in 13 species)
specific family

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Descriptions

Description
SKU5 similar 14
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Identifiers

Identifier Name
aliasSKU5 similar 14
aliassks14

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Biological Process

GO termEvidence(s)ProviderDescriptionSource
GO:0009827RCAGene Ontologyplant-type cell wall modification1
GO:0055114IEAInterProoxidation-reduction process
GO:0080167ISOPLAZA Tree-based Orthologyresponse to karrikinAT5G66920
GO:0044710IEAPLAZA Homologysingle-organism metabolic processHOM03D000193
GO:0044699IEAPLAZA Homologysingle-organism processHOM03D000193

Molecular Function

GO termEvidence(s)ProviderDescriptionSource
GO:0005507IEAInterProcopper ion binding
GO:0016491IEAInterProoxidoreductase activity
GO:0043169IEAPLAZA Homologycation bindingHOM03D000193
GO:0043167IEAPLAZA Homologyion bindingHOM03D000193
GO:0046914IEAPLAZA Homologytransition metal ion bindingHOM03D000193
GO:0046872IEAPLAZA Homologymetal ion bindingHOM03D000193

Cellular Component

GO termEvidence(s)ProviderDescriptionSource
GO:0005576ISMGene Ontologyextracellular region
GO:0009505ISOPLAZA Tree-based Orthologyplant-type cell wallAT5G66920

Color Legend

Computational Reviewed Evidence
Electronic Evidence
Experimental Evidence
GO Sources:   Primary     Orthology     Homology  
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InterPro Description
IPR011706Multicopper oxidase, type 2
IPR011707Multicopper oxidase, type 3
IPR008972Cupredoxin
IPR001117Multicopper oxidase, type 1
Mapman id Description
26.7misc.oxidases - copper, flavone etc
SignalP Description
SignalP-noTMSignal Peptide detected using noTM network