PLAZA Gymnosperms gene overview : AT1G08115

Gene: AT1G08115 (Arabidopsis thaliana)

Overview

Gene Identifier: AT1G08115
Transcript Identifier: AT1G08115.1
Gene Type: RNA gene
Location: 1 : 2538076-2538237 : negative

Family

No gene family defined for this gene.

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Descriptions

Description: snRNA

Curated Summary: U1A small nuclear RNA

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Identifiers

Identifier	Name

Toolbox

Explore

...the colinearity of this gene with other genomes.
...the local gene organization for homologous genes.
...the phylogenetic tree of the homologous gene family.
...the orthologs using the Integrative Orthology Viewer.
...the conserved binding sites (upstream/downstream,intron)

View

...sequences.
...the multiple sequence alignment of the gene family.
...BLAST hits against the PLAZA database.
...BLAST hits against NCBIs protein database.
...the gene in Genomeview, a genome browser
...all colinear gene pairs.

Biological Process

GO term	Evidence(s)	Provider	Description	Source
GO:0000398	TAS	Gene Ontology	mRNA splicing, via spliceosome	1

Cellular Component

GO term	Evidence(s)	Provider	Description	Source
GO:0005685	TAS	Gene Ontology	U1 snRNP	1

Color Legend

Computational Reviewed Evidence

Electronic Evidence

Experimental Evidence

No InterPro domains detected for this gene.

Mapman id	Description
27.1	RNA.processing

No SignalP domains detected for this gene.