Gene family: HOM03D000648 
- Sequences
- Sub-families
-
ORTHO03D007334
(13 genes in 12 species)
ORTHO03D011530
(8 genes in 6 species)
ORTHO03D013600
(6 genes in 3 species)
View all sub-families (18)
Keywords
Overview of gene family content
The gene family HOM03D000648 has 128 genes in 15 species (5 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
Gene list
Index of genes with 1 constraints:
- gene family : HOM03D000648
Page 1 of 7, showing 20 records out of 128 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AT1G22210 | ath | + | 1 | No |
| AT1G35910 | ath | - | 1 | No |
| AT1G78090 | ath | + | 1 | No |
| AT2G22190 | ath | - | 2 | No |
| AT4G12430 | ath | - | 4 | No |
| AT4G22590 | ath | - | 4 | No |
| AT4G39770 | ath | - | 4 | No |
| AT5G10100 | ath | + | 5 | No |
| AT5G51460 | ath | + | 5 | No |
| AT5G65140 | ath | - | 5 | No |
| ATR_00010G01600 | atr | + | scaffold00010 | No |
| ATR_00046G01140 | atr | + | scaffold00046 | No |
| ATR_00085G00020 | atr | + | scaffold00085 | No |
| ATR_00107G00210 | atr | + | scaffold00107 | No |
| CMI00019516 | cmi | - | scaffold-XZUY-0041324-Cycas_micholitzii | No |
| GBI00000713 | gbi | - | GB_scaffold-SGTW-0001552-Ginkgo_biloba | No |
| GBI00003412 | gbi | + | GB_scaffold-SGTW-0006627-Ginkgo_biloba | No |
| GBI00003413 | gbi | + | GB_scaffold-SGTW-0006627-Ginkgo_biloba | No |
| GBI00003947 | gbi | - | GB_scaffold-SGTW-0007591-Ginkgo_biloba | No |
| GBI00008069 | gbi | + | GB_scaffold-SGTW-0014056-Ginkgo_biloba | No |
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench