Gene family: HOM03D000498 
- Sequences
- Sub-families
-
ORTHO03D000088
(47 genes in 15 species)
ORTHO03D001020
(23 genes in 14 species)
ORTHO03D029226
(3 genes in 3 species)
View all sub-families (11)
Keywords
Overview of gene family content
The gene family HOM03D000498 has 156 genes in 16 species (9 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
Gene list
Index of genes with 1 constraints:
- gene family : HOM03D000498
Page 1 of 8, showing 20 records out of 156 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AT1G05610 | ath | - | 1 | No |
| AT1G27680 | ath | + | 1 | No |
| AT2G21590 | ath | + | 2 | No |
| AT4G39210 | ath | + | 4 | No |
| AT5G19220 | ath | - | 5 | No |
| AT5G48300 | ath | + | 5 | No |
| ATR_00003G01250 | atr | - | scaffold00003 | No |
| ATR_00011G00670 | atr | + | scaffold00011 | No |
| ATR_00025G00200 | atr | + | scaffold00025 | No |
| ATR_00025G00210 | atr | + | scaffold00025 | No |
| ATR_00061G00930 | atr | - | scaffold00061 | No |
| ATR_00066G00870 | atr | - | scaffold00066 | No |
| CMI00007583 | cmi | - | scaffold-XZUY-0010365-Cycas_micholitzii | No |
| CMI00011651 | cmi | - | scaffold-XZUY-0014792-Cycas_micholitzii | No |
| CMI00013084 | cmi | + | scaffold-XZUY-0016179-Cycas_micholitzii | No |
| CMI00013085 | cmi | + | scaffold-XZUY-0016179-Cycas_micholitzii | No |
| CMI00019888 | cmi | + | scaffold-XZUY-0042115-Cycas_micholitzii | No |
| CMI00023549 | cmi | + | scaffold-XZUY-0048612-Cycas_micholitzii | No |
| CMI00025448 | cmi | + | scaffold-XZUY-0051146-Cycas_micholitzii | No |
| CMI00025854 | cmi | - | scaffold-XZUY-0051584-Cycas_micholitzii | No |
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench