Gene family: HOM03D000123 
- Sequences
- Sub-families
-
ORTHO03D000006
(116 genes in 15 species)
ORTHO03D005506
(16 genes in 12 species)
ORTHO03D005546
(15 genes in 9 species)
View all sub-families (41)
Keywords
Overview of gene family content
The gene family HOM03D000123 has 468 genes in 16 species (36 outlier genes).
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Smallest encompassing phylogenetic clade for this gene family :
Tandem/block/both gene duplicate percentage within this gene family :
The order of species in the graph is based on the phylogenetic species tree.
Toolbox
Explore
- ...the local gene organization for homologous genes.
- ...the phylogenetic trees of this gene family.
- ...the expansion/depletion of species in this gene family.
View
Gene list
Index of genes with 1 constraints:
- gene family : HOM03D000123
Page 1 of 24, showing 20 records out of 468 total, starting on record 1, ending on 20
| gene_id | species | strand | chr | outlier |
|---|---|---|---|---|
| AT1G05570 | ath | - | 1 | No |
| AT1G06490 | ath | + | 1 | No |
| AT2G13680 | ath | + | 2 | No |
| AT2G30680 | ath | + | 2 | Yes |
| AT2G31960 | ath | + | 2 | No |
| AT2G36850 | ath | - | 2 | No |
| AT3G07160 | ath | - | 3 | No |
| AT3G14570 | ath | + | 3 | No |
| AT3G14780 | ath | - | 3 | No |
| AT3G32050 | ath | - | 3 | Yes |
| AT3G59100 | ath | + | 3 | No |
| AT4G03550 | ath | + | 4 | No |
| AT4G04970 | ath | + | 4 | No |
| AT5G13000 | ath | - | 5 | No |
| AT5G36870 | ath | + | 5 | No |
| ATR_00011G00280 | atr | - | scaffold00011 | No |
| ATR_00014G00080 | atr | + | scaffold00014 | Yes |
| ATR_00014G00090 | atr | + | scaffold00014 | No |
| ATR_00014G00100 | atr | + | scaffold00014 | No |
| ATR_00044G00620 | atr | - | scaffold00044 | No |
Expansion plot
Gene family finder
Ks-graphs
Skyline plot
Synteny plot
WGDotplot
Functional clusters
WGMapping
BLAST
Workbench