Tree Explorer: HOM03D000157  

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Species colored phylogenetic tree with associated protein domains.
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The stripped multiple sequence alignment used to infer the phylogenetic tree is only 60 amino acids long

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Protein domain view



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Legend

IPR013785
    Aldolase-type TIM barrel
IPR000583
    Class II glutamine amidotransferase domain
IPR028261
    Dihydroprymidine dehydrogenase domain II
IPR009051
    Alpha-helical ferredoxin
IPR006005
    Glutamate synthase, NADH/NADPH, small subunit 1
IPR002932
    Glutamate synthase, central-C
IPR017932
    Glutamine amidotransferase type 2 domain
IPR000554
    Ribosomal protein S7e
IPR023753
    Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
IPR016040
    NAD(P)-binding domain
IPR001005
    SANT/Myb domain
IPR006982
    Glutamate synthase, central-N
IPR002013
    Synaptojanin, N-terminal
IPR023395
    Mitochondrial carrier domain
IPR017877
    Myb-like domain
IPR002489
    Glutamate synthase, alpha subunit, C-terminal
IPR001327
    Pyridine nucleotide-disulphide oxidoreductase, NAD-binding domain
IPR023213
    Chloramphenicol acetyltransferase-like domain
IPR009057
    Homeodomain-like
Protein domains lacking coordinates are not displayed in the phylogenetic tree. This may appear to cause inconsistencies between the various pages also showing InterPro domain information.

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Multiple Sequence Alignment information

Method
muscle
Length
3544
View alignment of the entire gene family
Stripped length
60
View edited alignment used for tree construction

Outlier/stripped gene information

Gene id Status Cause
PME00107498 removed too diverged
GBI00006957 removed too diverged
PTA00047063 removed too diverged
GBI00012802 removed too diverged
PTA00011800 removed too diverged
GMO00018294 removed too diverged
PTA00051130 removed too diverged
PGL00004681 removed too diverged
PAB00004362 removed too diverged
TBA00025522 removed too diverged
PTA00065990 removed too diverged
PAB00012462 removed too diverged
PGL00003680 removed too diverged
CMI00004224 removed too diverged
PTA00011073 removed too diverged
PTA00053861 removed too diverged
CMI00016068 removed too diverged
PTA00051023 removed too diverged
CMI00017338 removed partial
PTA00002469 removed partial
CMI00016965 removed partial
CMI00016660 removed partial
PTA00002467 removed partial
PP00392G00160 removed partial
CMI00024565 removed outlier
CMI00026127 removed outlier
GBI00009639 removed outlier
GBI00013737 removed outlier
GBI00014580 removed outlier
GBI00019160 removed outlier
GBI00024417 removed outlier
GBI00025000 removed outlier
GBI00025596 removed outlier
GMO00025808 removed outlier
OS08G17100 removed outlier
PAB00001881 removed outlier
PAB00012948 removed outlier
PAB00025465 removed outlier
PGL00000275 removed outlier
PGL00009490 removed outlier
PGL00016371 removed outlier
PME00002470 removed outlier
PME00063360 removed outlier
PME00065244 removed outlier
PME00065249 removed outlier
PME00092531 removed outlier
PME00099790 removed outlier
PPI00029677 removed outlier
PPI00039163 removed outlier
PSI00001780 removed outlier
PSY00005888 removed outlier
PSY00005889 removed outlier
PSY00005890 removed outlier
PSY00007739 removed outlier
PSY00024834 removed outlier
PSY00027216 removed outlier
PTA00040221 removed outlier
PTA00046144 removed outlier
PTA00047062 removed outlier
PTA00050459 removed outlier
PTA00053825 removed outlier
PTA00071878 removed outlier
PTA00079572 removed outlier
TBA00019308 removed outlier