Tree Explorer: HOM03D000086  

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Species colored phylogenetic tree with associated protein domains.
Warning
The stripped multiple sequence alignment used to infer the phylogenetic tree is only 98 amino acids long

Protein domain view



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Legend

IPR011992
    EF-hand domain pair
IPR027417
    P-loop containing nucleoside triphosphate hydrolase
IPR002048
    EF-hand domain
IPR001650
    Helicase, C-terminal
IPR003299
    Flagellar calcium-binding protein calflagin
IPR014837
    EF-hand, Ca insensitive
IPR001125
    Recoverin like
Protein domains lacking coordinates are not displayed in the phylogenetic tree. This may appear to cause inconsistencies between the various pages also showing InterPro domain information.

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Multiple Sequence Alignment information

Method
muscle
Length
996
View alignment of the entire gene family
Stripped length
98
View edited alignment used for tree construction

Outlier/stripped gene information

Gene id Status Cause
OS01G72080 removed too diverged
TBA00025189 removed partial
GBI00024093 removed partial
TBA00011852 removed partial
CMI00019698 removed partial
TBA00022501 removed partial
PAB00054064 removed partial
TBA00009097 removed partial
TBA00022911 removed partial
TBA00027316 removed partial
PTA00074382 removed partial
PTA00075390 removed partial
GMO00020034 removed partial
PTA00071534 removed partial
PTA00051142 removed partial
PTA00065103 removed partial
PME00037254 removed partial
PAB00049434 removed partial
PTA00054172 removed partial
PAB00020030 removed partial
PTA00037730 removed partial
GMO00021236 removed partial
CMI00019775 removed partial
PTA00072794 removed partial
GBI00028815 removed partial
CMI00017864 removed partial
GMO00022484 removed partial
PME00147262 removed partial
AT3G01830 removed outlier
ATR_00008G00240 removed outlier
ATR_00054G00780 removed outlier
GBI00028375 removed outlier
GMO00017078 removed outlier
GMO00019637 removed outlier
GMO00025632 removed outlier
OS01G56030 removed outlier
OS05G22270 removed outlier
OS06G47640 removed outlier
PAB00011103 removed outlier
PAB00041251 removed outlier
PAB00049430 removed outlier
PGL00028472 removed outlier
PME00075749 removed outlier
PME00101668 removed outlier
PME00142912 removed outlier
PP00173G00300 removed outlier
PP00372G00040 removed outlier
PPI00032633 removed outlier
PPI00038167 removed outlier
PPI00038190 removed outlier
PPI00038738 removed outlier
PPI00039664 removed outlier
PPI00040189 removed outlier
PPI00040640 removed outlier
PPI00040861 removed outlier
PPI00041057 removed outlier
PPI00042295 removed outlier
PPI00044028 removed outlier
PPI00044047 removed outlier
PPI00051782 removed outlier
PPI00053374 removed outlier
PPI00056429 removed outlier
PPI00056503 removed outlier
PPI00070973 removed outlier
PSI00013459 removed outlier
PT12G09600 removed outlier
PTA00002839 removed outlier
PTA00016695 removed outlier
PTA00024276 removed outlier
PTA00024381 removed outlier
PTA00025244 removed outlier
PTA00031389 removed outlier
PTA00041304 removed outlier
PTA00053103 removed outlier
PTA00053170 removed outlier
PTA00053183 removed outlier
PTA00063124 removed outlier
PTA00065273 removed outlier