Gene: Solyc12g044400.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc12g044400.3
  • Transcript Identifier Solyc12g044400.3.1
  • Gene Type Coding gene
  • Location SL4.0ch12 : 58959179-58971269 : negative

Gene Family Information

  • ID HOM05M000034
  • #Genes/#Species 3823/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc12g044400.3.1
  • uniprot A0A3Q7J9W6

Descriptions

  • Description ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** A0A2I0W975_9ASPA)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0045037
ISO
PLAZA Integrative Orthologyprotein import into chloroplast stroma AT3G16290
GO:0006508
IBA
IEA
GOA Databaseproteolysis
GO:0006508
IEA
InterProproteolysis

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0016464
ISO
PLAZA Integrative Orthologychloroplast protein-transporting ATPase activity AT3G16290
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT3G16290
GO:0004176
IBA
IEA
GOA DatabaseATP-dependent peptidase activity
GO:0004176
IEA
InterProATP-dependent peptidase activity
GO:0004222
IEA
GOA Databasemetalloendopeptidase activity
GO:0004222
IEA
InterPrometalloendopeptidase activity
GO:0008233
IEA
GOA Databasepeptidase activity
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016887
IEA
InterProATP hydrolysis activity

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0062091
ISO
PLAZA Integrative OrthologyYcf2/FtsHi complex AT3G16290
GO:0009941
ISO
PLAZA Integrative Orthologychloroplast envelope AT3G16290
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast AT3G16290
GO:0009534
IBA
GOA Databasechloroplast thylakoid
GO:0016020
IEA
GOA Databasemembrane
GO:0016021
IEA
GOA Databaseintegral component of membrane

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR041569 AAA ATPase, AAA+ lid domain
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR037219 Peptidase M41-like
IPR003959 ATPase, AAA-type, core
IPR000642 Peptidase M41
IPR003593 AAA+ ATPase domain
Mapman id Description
23.1.3.4.1.2 Protein translocation.chloroplast.inner envelope TIC translocation system.AAA-ATPase motor complex.FtsH12-FtsHi subcomplex.component FtsHi