Gene: Solyc11g067110.2

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc11g067110.2
Transcript Identifier Solyc11g067110.2.1
Gene Type Coding gene
Location SL4.0ch11 : 50878038-50884770 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05M003488
#Genes/#Species 110/53
Phylogenetic origin

ID ORTHO05M005425
#Genes/#Species 89/53
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Solyc11g067110.2.1

Descriptions

Short descriptions
Ortholog descriptions

Description DNA polymerase epsilon catalytic subunit (AHRD V3.3 *-* A0A2G2YHJ1_CAPAN)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006260	IEA	InterPro	DNA replication
GO:0006281	IEA	InterPro	DNA repair
GO:0010086	ISO	PLAZA Integrative Orthology	embryonic root morphogenesis	AT1G08260
GO:0051302	ISO	PLAZA Integrative Orthology	regulation of cell division	AT1G08260
GO:0009793	ISO	PLAZA Integrative Orthology	embryo development ending in seed dormancy	AT1G08260
GO:0048579	ISO	PLAZA Integrative Orthology	negative regulation of long-day photoperiodism, flowering	AT1G08260

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003677	IEA	InterPro	DNA binding
GO:0003887	IEA	InterPro	DNA-directed DNA polymerase activity
GO:0003676	IEA	InterPro	nucleic acid binding
GO:0000166	ISO	PLAZA Homology (enrichment)	nucleotide binding	HOM05M003488
GO:0008270	ISO	PLAZA Homology (enrichment)	zinc ion binding	HOM05M003488
GO:0005515	ISO	PLAZA Integrative Orthology	protein binding	AT1G08260

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0008622	IEA	InterPro	epsilon DNA polymerase complex
GO:0005634	ISO	PLAZA Homology (enrichment)	nucleus	HOM05M003488
GO:0048046	ISO	PLAZA Integrative Orthology	apoplast	AT1G08260

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR006133	DNA-directed DNA polymerase, family B, exonuclease domain
IPR029703	DNA polymerase epsilon catalytic subunit
IPR012337	Ribonuclease H-like superfamily
IPR036397	Ribonuclease H superfamily

Mapman id	Description
35.1	not assigned.annotated