Gene: Solyc08g028950.3

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc08g028950.3
  • Transcript Identifier Solyc08g028950.3.1
  • Gene Type Coding gene
  • Location SL4.0ch08 : 37964145-37964856 : positive

Gene Family Information

  • ID HOM05M000524
  • #Genes/#Species 554/40
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc08g028950.3.1
  • uniprot A0A3Q7HMU3

Descriptions

  • Description DNA-directed RNA polymerase subunit beta' (AHRD V3.3 *-* F6I7T7_OLEEU)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0006351
IEA
GOA Databasetranscription, DNA-templated
GO:0006351
IEA
InterProtranscription, DNA-templated
GO:0006354
ISO
PLAZA Integrative OrthologyDNA-templated transcription, elongation ATCG00180

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0003677
IEA
GOA DatabaseDNA binding
GO:0003677
IEA
InterProDNA binding
GO:0003899
IEA
GOA DatabaseDNA-directed 5'-3' RNA polymerase activity
GO:0003899
IEA
InterProDNA-directed 5'-3' RNA polymerase activity
GO:0046872
IEA
GOA Databasemetal ion binding
GO:0016779
IEA
GOA Databasenucleotidyltransferase activity
GO:0016740
IEA
GOA Databasetransferase activity
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding ATCG00180

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0009507
ISO
PLAZA Integrative Orthologychloroplast ATCG00180
GO:0042644
ISO
PLAZA Integrative Orthologychloroplast nucleoid ATCG00180

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR000722 RNA polymerase, alpha subunit
IPR006592 RNA polymerase, N-terminal
IPR007080 RNA polymerase Rpb1, domain 1
Mapman id Description
35.1 not assigned.annotated