Gene: Solyc08g028890.1

General Information

Structural Information

Species Solanum lycopersicum
Gene Identifier Solyc08g028890.1
Transcript Identifier Solyc08g028890.1.1
Gene Type Coding gene
Location SL4.0ch08 : 37969605-37969790 : positive

Gene Family Information

Homologous GF
Orthologous GF

ID HOM05M000524
#Genes/#Species 554/40
Phylogenetic origin

ID ORTHO05M002952
#Genes/#Species 139/31
Phylogenetic origin

Gene Duplication Information

Tandem Duplication Tandem duplicate

Labels

Identifiers

tid Solyc08g028890.1.1
uniprot A0A3Q7HMY4

Descriptions

Short descriptions
Ortholog descriptions

Description 30S ribosomal protein S2, chloroplastic (AHRD V3.3 *-* A0A2G3B243_CAPCH)

Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0006412	IEA	GOA Database	translation
GO:0006412	IEA	InterPro	translation

Molecular Function

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0003735	IBA IEA	GOA Database	structural constituent of ribosome
GO:0003735	IEA	InterPro	structural constituent of ribosome
GO:0003729	ISO	PLAZA Integrative Orthology	mRNA binding	ATCG00160

Cellular Component

GO term	Evidence(s)	Provider(s)	Description	Source(s)
GO:0005840	IEA	GOA Database	ribosome
GO:0005840	IEA	InterPro	ribosome
GO:0015935	IEA	GOA Database	small ribosomal subunit
GO:0015935	IEA	InterPro	small ribosomal subunit
GO:0022627	IBA	GOA Database	cytosolic small ribosomal subunit
GO:0009570	ISO	PLAZA Integrative Orthology	chloroplast stroma	ATCG00160
GO:0009507	ISO	PLAZA Integrative Orthology	chloroplast	ATCG00160
GO:0000312	ISO	PLAZA Integrative Orthology	plastid small ribosomal subunit	ATCG00160

Color Legend

Experimental Evidence

Computational Reviewed Evidence

Electronic Evidence

InterPro	Description
IPR001865	Ribosomal protein S2
IPR005706	Ribosomal protein S2, bacteria/mitochondria/plastid
IPR023591	Ribosomal protein S2, flavodoxin-like domain superfamily

Mapman id	Description
35.1	not assigned.annotated