Gene: Solyc06g065700.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g065700.3
- Transcript Identifier Solyc06g065700.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 38763811-38779006 : positive
Gene Family Information
- ID HOM05M003397
- #Genes/#Species 112/50
- Phylogenetic origin
- ID ORTHO05M004183
- #Genes/#Species 108/50
- Phylogenetic origin
Gene Duplication Information
Labels
Identifiers
- tid Solyc06g065700.3.1
- uniprot A0A3Q7GZ21
Descriptions
- Description WD40 repeat (AHRD V3.3 *** A0A200QHW0_9MAGN)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0006367 | IBA | GOA Database | transcription initiation from RNA polymerase II promoter |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005515 | IEA | InterPro | protein binding | |
| GO:0016251 | IBA | GOA Database | RNA polymerase II general transcription initiation factor activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005634 | IEA | GOA Database | nucleus | |
| GO:0005669 | IBA | GOA Database | transcription factor TFIID complex |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR001680 | WD40 repeat |
| IPR036322 | WD40-repeat-containing domain superfamily |
| IPR037264 | TFIID subunit TAF5, NTD2 domain superfamily |
| IPR007582 | TFIID subunit TAF5, NTD2 domain |
| IPR015943 | WD40/YVTN repeat-like-containing domain superfamily |
| IPR020472 | G-protein beta WD-40 repeat |
| IPR037783 | Transcription initiation factor TFIID subunit 5 |
| Mapman id | Description |
|---|---|
| 15.3.4.1.1 | RNA biosynthesis.RNA polymerase II-dependent transcription.transcription co-activation.TAF module shared with SAGA/TFIId complexes.component TAF5 |