Gene: Solyc06g035970.3
General Information
Structural Information
- Species Solanum lycopersicum
- Gene Identifier Solyc06g035970.3
- Transcript Identifier Solyc06g035970.3.1
- Gene Type Coding gene
- Location SL4.0ch06 : 23171155-23173795 : negative
Gene Family Information
- ID HOM05M000157
- #Genes/#Species 1370/53
- Phylogenetic origin
- ID ORTHO05M000338
- #Genes/#Species 631/52
- Phylogenetic origin
Gene Duplication Information
- Block Duplication Block duplicate
Labels
Identifiers
- tid Solyc06g035970.3.1
- uniprot A0A3Q7GRM6
Descriptions
- Description Tubulin beta chain (AHRD V3.3 *** A0A2G3C5Z8_CAPCH)
- Loading (ortholog descriptions from ath)...
Functional Annotation
Biological Process
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0007017 | IEA | GOA Database | microtubule-based process | |
| GO:0007017 | IEA | InterPro | microtubule-based process | |
| GO:0007010 | IEA | GOA Database | cytoskeleton organization |
Molecular Function
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005200 | IEA | GOA Database | structural constituent of cytoskeleton | |
| GO:0005200 | IEA | InterPro | structural constituent of cytoskeleton | |
| GO:0005525 | IEA | GOA Database | GTP binding | |
| GO:0005525 | IEA | InterPro | GTP binding | |
| GO:0003924 | IEA | GOA Database | GTPase activity | |
| GO:0003924 | IEA | InterPro | GTPase activity | |
| GO:0000166 | IEA | GOA Database | nucleotide binding | |
| GO:0008757 | IBA | GOA Database | S-adenosylmethionine-dependent methyltransferase activity |
Cellular Component
| GO term | Evidence(s) | Provider(s) | Description | Source(s) |
|---|---|---|---|---|
| GO:0005874 | IEA | GOA Database | microtubule | |
| GO:0005874 | IEA | InterPro | microtubule | |
| GO:0005856 | IEA | GOA Database | cytoskeleton |
Color Legend
| Experimental Evidence |
| Computational Reviewed Evidence |
| Electronic Evidence |
| InterPro | Description |
|---|---|
| IPR036525 | Tubulin/FtsZ, GTPase domain superfamily |
| IPR018316 | Tubulin/FtsZ, 2-layer sandwich domain |
| IPR000217 | Tubulin |
| IPR023123 | Tubulin, C-terminal |
| IPR002453 | Beta tubulin |
| IPR008280 | Tubulin/FtsZ, C-terminal |
| IPR037103 | Tubulin/FtsZ-like, C-terminal domain |
| IPR003008 | Tubulin/FtsZ, GTPase domain |
| Mapman id | Description |
|---|---|
| 20.1.1.2 | Cytoskeleton organisation.microtubular network.alpha-beta-Tubulin heterodimer.component beta-Tubulin |