Gene: Solyc04g008030.2

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc04g008030.2
  • Transcript Identifier Solyc04g008030.2.1
  • Gene Type Coding gene
  • Location SL4.0ch04 : 1713181-1727962 : negative

Gene Family Information

  • ID HOM05M001578
  • #Genes/#Species 217/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc04g008030.2.1
  • uniprot A0A3Q7GP03

Descriptions

  • Description Cleavage and polyadenylation specificity factor subunit 3-II (AHRD V3.3 *** A0A2G3CFF4_CAPCH)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Biological Process

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0016180
IBA
GOA DatabasesnRNA processing
GO:0010197
ISO
PLAZA Integrative Orthologypolar nucleus fusion AT2G01730

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005515
ISO
PLAZA Integrative Orthologyprotein binding AT2G01730

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
IEA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR036866 Ribonuclease Z/Hydroxyacylglutathione hydrolase-like
IPR001279 Metallo-beta-lactamase
IPR011108 Zn-dependent metallo-hydrolase, RNA specificity domain
IPR041897 Integrator complex subunit 11, MBL-fold
IPR022712 Beta-Casp domain
Mapman id Description
16.3.1.2.4 RNA processing.RNA 3'-end processing.mRNA polyadenylation.Cleavage and Polyadenylation Specificity Factor (CPSF) complex.nuclease component CPSF73-II