Gene: Solyc01g006970.4

General Information

Structural Information

  • Species Solanum lycopersicum
  • Gene Identifier Solyc01g006970.4
  • Transcript Identifier Solyc01g006970.4.1
  • Gene Type Coding gene
  • Location SL4.0ch01 : 1548675-1557832 : positive

Gene Family Information

  • ID HOM05M000138
  • #Genes/#Species 1529/53
  • Phylogenetic origin

Gene Duplication Information

Labels

Identifiers

  • tid Solyc01g006970.4.1
  • uniprot A0A3Q7E8C6

Descriptions

  • Description RNA helicase family protein (AHRD V3.3 *** A0A2U1PBZ9_ARTAN)
  • Loading (ortholog descriptions from ath)...

Functional Annotation

Molecular Function

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0004386
IEA
GOA Databasehelicase activity
GO:0004386
IEA
InterProhelicase activity
GO:0003676
IEA
GOA Databasenucleic acid binding
GO:0003676
IEA
InterPronucleic acid binding
GO:0005524
IEA
GOA DatabaseATP binding
GO:0005524
IEA
InterProATP binding
GO:0003724
IEA
GOA DatabaseRNA helicase activity
GO:0000166
IEA
GOA Databasenucleotide binding
GO:0016787
IEA
GOA Databasehydrolase activity
GO:0003723
IBA
GOA DatabaseRNA binding
GO:0003729
ISO
PLAZA Integrative OrthologymRNA binding AT2G35920

Cellular Component

GO termEvidence(s)Provider(s)DescriptionSource(s)
GO:0005634
IBA
GOA Databasenucleus

Color Legend

Experimental Evidence
Computational Reviewed Evidence
Electronic Evidence
GO Sources: Primary Orthology Homology
Show redundant parents:
InterPro Description
IPR014001 Helicase superfamily 1/2, ATP-binding domain
IPR007502 Helicase-associated domain
IPR001650 Helicase, C-terminal
IPR027417 P-loop containing nucleoside triphosphate hydrolase
IPR011709 Domain of unknown function DUF1605
IPR011545 DEAD/DEAH box helicase domain
Mapman id Description
35.1 not assigned.annotated