Functional clusters
Information
- Type InterPro
- Description Flowering-promoting factor 1
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 2D | 5 | CH_ata_130 | 4 | 4 | 0.00000000035858 |
| Calamus simplicifolius | scaffold360 | 5 | CH_calsi_214 | 3 | 5 | 0.00000135177 |
| Digitaria exilis | Dexi_CM05836_chr05A | 5 | CH_dex_635 | 3 | 4 | 0.000000562881 |
| Digitaria exilis | Dexi_CM05836_chr05B | 5 | CH_dex_692 | 3 | 5 | 0.00000140707 |
| Eragrostis curvula | Contig25 | 5 | CH_ecu_1299 | 2 | 2 | 0.000232635 |
| Elaeis guineensis | EG5.1_Chr14 | 5 | CH_egu_550 | 2 | 2 | 0.000947329 |
| Hordeum vulgare | chr6H | 5 | CH_hvu_182 | 4 | 4 | 0.000000000364981 |
| Hordeum vulgare | chr2H | 5 | CH_hvu_263 | 4 | 8 | 0.0000000255267 |
| Lolium perenne | Lp_chr2_0 | 5 | CH_lpe_773 | 2 | 2 | 0.000899989 |
| Secale cereale | GWHASIY00000002 | 5 | CH_sce_1241 | 3 | 10 | 0.000495117 |
| Secale cereale | GWHASIY00000004 | 5 | CH_sce_609 | 3 | 3 | 0.00000413552 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_284 | 3 | 3 | 0.0000000516764 |
| Spirodela polyrhiza | pseudo5 | 5 | CH_spo_113 | 3 | 3 | 0.0000000623308 |
| Setaria viridis | Chr_08 | 5 | CH_svi_863 | 2 | 2 | 0.000782677 |
| Triticum aestivum | Chr2D | 5 | CH_tae_2254 | 3 | 8 | 0.000247661 |
| Vanilla planifolia | CM028163.1 | 5 | CH_vpl_426 | 2 | 2 | 0.000073888 |
| Aegilops tauschii | 2D | 6 | CH_ata_130 | 4 | 4 | 0.00000000035858 |
| Calamus simplicifolius | scaffold360 | 6 | CH_calsi_214 | 3 | 5 | 0.00000135177 |
| Digitaria exilis | Dexi_CM05836_chr05A | 6 | CH_dex_635 | 3 | 4 | 0.000000562881 |
| Digitaria exilis | Dexi_CM05836_chr05B | 6 | CH_dex_692 | 3 | 5 | 0.00000140707 |
| Eragrostis curvula | Contig25 | 6 | CH_ecu_1299 | 2 | 2 | 0.000232635 |
| Elaeis guineensis | EG5.1_Chr14 | 6 | CH_egu_550 | 2 | 2 | 0.000947329 |
| Hordeum vulgare | chr6H | 6 | CH_hvu_182 | 4 | 4 | 0.000000000364981 |
| Hordeum vulgare | chr2H | 6 | CH_hvu_263 | 4 | 8 | 0.0000000255267 |
| Lolium perenne | Lp_chr2_0 | 6 | CH_lpe_773 | 2 | 2 | 0.000899989 |
| Secale cereale | GWHASIY00000002 | 6 | CH_sce_1241 | 3 | 10 | 0.000495117 |
| Secale cereale | GWHASIY00000004 | 6 | CH_sce_609 | 3 | 3 | 0.00000413552 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_284 | 3 | 3 | 0.0000000516764 |
| Spirodela polyrhiza | pseudo5 | 6 | CH_spo_113 | 3 | 3 | 0.0000000623308 |
| Setaria viridis | Chr_08 | 6 | CH_svi_863 | 2 | 2 | 0.000782677 |
| Triticum aestivum | Chr2D | 6 | CH_tae_2254 | 3 | 8 | 0.000247661 |
| Vanilla planifolia | CM028163.1 | 6 | CH_vpl_426 | 2 | 2 | 0.000073888 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |