Functional clusters
Information
- Type InterPro
- Description Plant non-specific lipid-transfer protein/Par allergen
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Allium sativum | chr3 | 5 | CH_asa_162 | 7 | 14 | 0.00000000000263172 |
| Allium sativum | chr7_2 | 5 | CH_asa_168 | 6 | 7 | 0.00000000000382279 |
| Allium sativum | chr2 | 5 | CH_asa_284 | 5 | 6 | 0.00000000228504 |
| Allium sativum | chr3 | 5 | CH_asa_62 | 9 | 13 | 1.05653e-18 |
| Arabidopsis thaliana | Chr5 | 5 | CH_ath_303 | 3 | 3 | 0.0000049986 |
| Amborella trichopoda | AmTr_v1.0_scaffold00092 | 5 | CH_atr_146 | 4 | 4 | 0.00000000583024 |
| Amborella trichopoda | AmTr_v1.0_scaffold00077 | 5 | CH_atr_181 | 4 | 5 | 0.0000000291362 |
| Ceratophyllum demersum | 5 | 5 | CH_cde_497 | 2 | 2 | 0.000789796 |
| Cenchrus purpureus | GWHAORA00000001 | 5 | CH_cpu_1060 | 3 | 3 | 0.0000141632 |
| Cenchrus purpureus | GWHAORA00000003 | 5 | CH_cpu_198 | 8 | 42 | 0.0000000000000455644 |
| Cenchrus purpureus | GWHAORA00000009 | 5 | CH_cpu_498 | 4 | 4 | 0.00000000810024 |
| Digitaria exilis | Dexi_CM05836_chr08B | 5 | CH_dex_436 | 4 | 4 | 0.0000000138204 |
| Digitaria exilis | Dexi_CM05836_chr08A | 5 | CH_dex_437 | 4 | 4 | 0.0000000138204 |
| Digitaria exilis | Dexi_CM05836_chr03B | 5 | CH_dex_438 | 4 | 4 | 0.0000000138204 |
| Digitaria exilis | Dexi_CM05836_chr03A | 5 | CH_dex_519 | 4 | 5 | 0.000000069065 |
| Eragrostis curvula | 6 | 5 | CH_ecu_1005 | 3 | 3 | 0.0000206084 |
| Eragrostis curvula | 2 | 5 | CH_ecu_174 | 9 | 27 | 7.12428e-18 |
| Elaeis guineensis | EG5.1_Chr5 | 5 | CH_egu_258 | 3 | 4 | 0.0000828667 |
| Glycine max | Gm03 | 5 | CH_gma_348 | 6 | 42 | 0.000000207553 |
| Glycine max | Gm01 | 5 | CH_gma_425 | 5 | 25 | 0.00000233686 |
| Glycine max | Gm18 | 5 | CH_gma_79 | 7 | 11 | 0.000000000000011943 |
| Hordeum vulgare | chr2H | 5 | CH_hvu_448 | 3 | 3 | 0.0000111053 |
| Hordeum vulgare | chr7H | 5 | CH_hvu_709 | 3 | 7 | 0.000387992 |
| Hordeum vulgare | chr3H | 5 | CH_hvu_93 | 6 | 7 | 0.0000000000000127634 |
| Lolium perenne | Lp_chr4_0 | 5 | CH_lpe_78 | 6 | 16 | 0.000000000000622555 |
| Musa acuminata | chr04 | 5 | CH_mac_123 | 4 | 6 | 0.0000000730298 |
| Magnolia biondii | Chr02 | 5 | CH_mbi_390 | 5 | 26 | 0.0000000717311 |
| Miscanthus sinensis | Chr15 | 5 | CH_msi_665 | 3 | 4 | 0.0000308434 |
| Miscanthus sinensis | Chr14 | 5 | CH_msi_666 | 3 | 4 | 0.0000308434 |
| Oryza alta | GWHAZTO00000011 | 5 | CH_oal_433 | 4 | 5 | 0.0000000218862 |
| Oryza alta | GWHAZTO00000024 | 5 | CH_oal_434 | 4 | 5 | 0.0000000218862 |
| Oryza alta | GWHAZTO00000012 | 5 | CH_oal_949 | 3 | 4 | 0.000039494 |
| Oryza brachyantha | 11 | 5 | CH_obr_156 | 4 | 6 | 0.0000000228133 |
| Oryza brachyantha | 12 | 5 | CH_obr_173 | 4 | 7 | 0.0000000532129 |
| Oryza sativa ssp. indica | Chr11 | 5 | CH_osaindica_427 | 3 | 4 | 0.0000246511 |
| Oryza sativa ssp. indica | Chr12 | 5 | CH_osaindica_592 | 3 | 7 | 0.000215442 |
| Oryza sativa Kitaake | Chr12 | 5 | CH_osak_109 | 6 | 6 | 0.0000000000000170996 |
| Oryza sativa Kitaake | Chr11 | 5 | CH_osak_189 | 5 | 6 | 0.000000000125607 |
| Oryza sativa ssp. japonica | chr11 | 5 | CH_osa_275 | 4 | 6 | 0.00000018146 |
| Oryza sativa ssp. japonica | chr12 | 5 | CH_osa_98 | 6 | 9 | 0.000000000000460394 |
| Oropetium thomaeum | Chromosome_2 | 5 | CH_oth_190 | 3 | 3 | 0.0000134616 |
| Panicum hallii | Chr03 | 5 | CH_pha_204 | 4 | 4 | 0.0000000088018 |
| Panicum hallii | Chr08 | 5 | CH_pha_234 | 4 | 5 | 0.0000000439852 |
| Populus trichocarpa | Chr16 | 5 | CH_ptr_194 | 5 | 6 | 0.000000000288984 |
| Sorghum bicolor | Chr08 | 5 | CH_sbi_223 | 4 | 5 | 0.00000000551156 |
| Secale cereale | GWHASIY00000004 | 5 | CH_sce_1148 | 3 | 5 | 0.000383191 |
| Secale cereale | GWHASIY00000003 | 5 | CH_sce_50 | 8 | 9 | 1.6667e-19 |
| Secale cereale | GWHASIY00000005 | 5 | CH_sce_788 | 3 | 3 | 0.0000383733 |
| Sequoiadendron giganteum | chr7 | 5 | CH_sgi_459 | 6 | 9 | 0.000000000000573444 |
| Sequoiadendron giganteum | chr2 | 5 | CH_sgi_628 | 5 | 6 | 0.0000000000601226 |
| Setaria italica | scaffold_8 | 5 | CH_sit_241 | 4 | 4 | 0.00000000877118 |
| Setaria italica | scaffold_7 | 5 | CH_sit_242 | 4 | 4 | 0.00000000877118 |
| Solanum lycopersicum | SL4.0ch08 | 5 | CH_sly_122 | 6 | 6 | 0.000000000000192388 |
| Solanum lycopersicum | SL4.0ch01 | 5 | CH_sly_441 | 4 | 7 | 0.00000411835 |
| Solanum lycopersicum | SL4.0ch10 | 5 | CH_sly_47 | 11 | 24 | 1.05406e-21 |
| Solanum lycopersicum | SL4.0ch06 | 5 | CH_sly_646 | 3 | 3 | 0.0000893795 |
| Solanum lycopersicum | SL4.0ch10 | 5 | CH_sly_647 | 3 | 3 | 0.0000893795 |
| Spirodela polyrhiza | pseudo3 | 5 | CH_spo_61 | 5 | 7 | 0.000000000105084 |
| Spirodela polyrhiza | pseudo22 | 5 | CH_spo_81 | 5 | 11 | 0.00000000230666 |
| Saccharum spontaneum | Chr7B | 5 | CH_ssp_177 | 5 | 5 | 0.00000000000263955 |
| Saccharum spontaneum | Chr7C | 5 | CH_ssp_248 | 5 | 8 | 0.000000000147638 |
| Saccharum spontaneum | Chr7A | 5 | CH_ssp_538 | 4 | 7 | 0.00000019337 |
| Setaria viridis | Chr_07 | 5 | CH_svi_250 | 4 | 4 | 0.00000000748007 |
| Setaria viridis | Chr_08 | 5 | CH_svi_283 | 4 | 5 | 0.0000000373814 |
| Triticum aestivum | Chr3B | 5 | CH_tae_10 | 19 | 19 | 2.04811e-51 |
| Triticum aestivum | Chr2B | 5 | CH_tae_1185 | 4 | 4 | 0.00000025218 |
| Triticum aestivum | Chr3A | 5 | CH_tae_2225 | 3 | 3 | 0.000205809 |
| Triticum aestivum | Chr5A | 5 | CH_tae_2616 | 3 | 4 | 0.000822473 |
| Triticum aestivum | Chr7B | 5 | CH_tae_2617 | 3 | 4 | 0.000822473 |
| Triticum aestivum | Chr7D | 5 | CH_tae_2618 | 3 | 4 | 0.000822473 |
| Triticum aestivum | Chr5D | 5 | CH_tae_2619 | 3 | 4 | 0.000822473 |
| Triticum aestivum | ChrUnknown | 5 | CH_tae_325 | 7 | 8 | 0.00000000000000354024 |
| Triticum turgidum | chr3B | 5 | CH_ttu_19 | 12 | 18 | 1.6827e-28 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00028.1 | 5 | CH_zjn_27 | 5 | 5 | 0.00000000000166857 |
| Allium sativum | chr3 | 6 | CH_asa_162 | 7 | 14 | 0.00000000000263172 |
| Allium sativum | chr7_2 | 6 | CH_asa_168 | 6 | 7 | 0.00000000000382279 |
| Allium sativum | chr2 | 6 | CH_asa_284 | 5 | 6 | 0.00000000228504 |
| Allium sativum | chr3 | 6 | CH_asa_62 | 9 | 13 | 1.05653e-18 |
| Arabidopsis thaliana | Chr5 | 6 | CH_ath_303 | 3 | 3 | 0.0000049986 |
| Amborella trichopoda | AmTr_v1.0_scaffold00092 | 6 | CH_atr_146 | 4 | 4 | 0.00000000583024 |
| Amborella trichopoda | AmTr_v1.0_scaffold00077 | 6 | CH_atr_181 | 4 | 5 | 0.0000000291362 |
| Ceratophyllum demersum | 5 | 6 | CH_cde_497 | 2 | 2 | 0.000789796 |
| Cenchrus purpureus | GWHAORA00000001 | 6 | CH_cpu_1060 | 3 | 3 | 0.0000141632 |
| Cenchrus purpureus | GWHAORA00000003 | 6 | CH_cpu_198 | 8 | 42 | 0.0000000000000455644 |
| Cenchrus purpureus | GWHAORA00000009 | 6 | CH_cpu_498 | 4 | 4 | 0.00000000810024 |
| Digitaria exilis | Dexi_CM05836_chr08B | 6 | CH_dex_436 | 4 | 4 | 0.0000000138204 |
| Digitaria exilis | Dexi_CM05836_chr08A | 6 | CH_dex_437 | 4 | 4 | 0.0000000138204 |
| Digitaria exilis | Dexi_CM05836_chr03B | 6 | CH_dex_438 | 4 | 4 | 0.0000000138204 |
| Digitaria exilis | Dexi_CM05836_chr03A | 6 | CH_dex_519 | 4 | 5 | 0.000000069065 |
| Eragrostis curvula | 6 | 6 | CH_ecu_1005 | 3 | 3 | 0.0000206084 |
| Eragrostis curvula | 2 | 6 | CH_ecu_174 | 9 | 27 | 7.12428e-18 |
| Elaeis guineensis | EG5.1_Chr5 | 6 | CH_egu_258 | 3 | 4 | 0.0000828667 |
| Glycine max | Gm03 | 6 | CH_gma_348 | 6 | 42 | 0.000000207553 |
| Glycine max | Gm01 | 6 | CH_gma_425 | 5 | 25 | 0.00000233686 |
| Glycine max | Gm18 | 6 | CH_gma_79 | 7 | 11 | 0.000000000000011943 |
| Hordeum vulgare | chr2H | 6 | CH_hvu_448 | 3 | 3 | 0.0000111053 |
| Hordeum vulgare | chr7H | 6 | CH_hvu_709 | 3 | 7 | 0.000387992 |
| Hordeum vulgare | chr3H | 6 | CH_hvu_93 | 6 | 7 | 0.0000000000000127634 |
| Lolium perenne | Lp_chr4_0 | 6 | CH_lpe_78 | 6 | 16 | 0.000000000000622555 |
| Musa acuminata | chr04 | 6 | CH_mac_123 | 4 | 6 | 0.0000000730298 |
| Magnolia biondii | Chr02 | 6 | CH_mbi_390 | 5 | 26 | 0.0000000717311 |
| Miscanthus sinensis | Chr15 | 6 | CH_msi_665 | 3 | 4 | 0.0000308434 |
| Miscanthus sinensis | Chr14 | 6 | CH_msi_666 | 3 | 4 | 0.0000308434 |
| Oryza alta | GWHAZTO00000011 | 6 | CH_oal_433 | 4 | 5 | 0.0000000218862 |
| Oryza alta | GWHAZTO00000024 | 6 | CH_oal_434 | 4 | 5 | 0.0000000218862 |
| Oryza alta | GWHAZTO00000012 | 6 | CH_oal_949 | 3 | 4 | 0.000039494 |
| Oryza brachyantha | 11 | 6 | CH_obr_156 | 4 | 6 | 0.0000000228133 |
| Oryza brachyantha | 12 | 6 | CH_obr_173 | 4 | 7 | 0.0000000532129 |
| Oryza sativa ssp. indica | Chr11 | 6 | CH_osaindica_427 | 3 | 4 | 0.0000246511 |
| Oryza sativa ssp. indica | Chr12 | 6 | CH_osaindica_592 | 3 | 7 | 0.000215442 |
| Oryza sativa Kitaake | Chr12 | 6 | CH_osak_109 | 6 | 6 | 0.0000000000000170996 |
| Oryza sativa Kitaake | Chr11 | 6 | CH_osak_189 | 5 | 6 | 0.000000000125607 |
| Oryza sativa ssp. japonica | chr11 | 6 | CH_osa_275 | 4 | 6 | 0.00000018146 |
| Oryza sativa ssp. japonica | chr12 | 6 | CH_osa_98 | 6 | 9 | 0.000000000000460394 |
| Oropetium thomaeum | Chromosome_2 | 6 | CH_oth_190 | 3 | 3 | 0.0000134616 |
| Panicum hallii | Chr03 | 6 | CH_pha_204 | 4 | 4 | 0.0000000088018 |
| Panicum hallii | Chr08 | 6 | CH_pha_234 | 4 | 5 | 0.0000000439852 |
| Populus trichocarpa | Chr16 | 6 | CH_ptr_194 | 5 | 6 | 0.000000000288984 |
| Sorghum bicolor | Chr08 | 6 | CH_sbi_223 | 4 | 5 | 0.00000000551156 |
| Secale cereale | GWHASIY00000004 | 6 | CH_sce_1148 | 3 | 5 | 0.000383191 |
| Secale cereale | GWHASIY00000003 | 6 | CH_sce_50 | 8 | 9 | 1.6667e-19 |
| Secale cereale | GWHASIY00000005 | 6 | CH_sce_788 | 3 | 3 | 0.0000383733 |
| Sequoiadendron giganteum | chr7 | 6 | CH_sgi_459 | 6 | 9 | 0.000000000000573444 |
| Sequoiadendron giganteum | chr2 | 6 | CH_sgi_628 | 5 | 6 | 0.0000000000601226 |
| Setaria italica | scaffold_8 | 6 | CH_sit_241 | 4 | 4 | 0.00000000877118 |
| Setaria italica | scaffold_7 | 6 | CH_sit_242 | 4 | 4 | 0.00000000877118 |
| Solanum lycopersicum | SL4.0ch08 | 6 | CH_sly_122 | 6 | 6 | 0.000000000000192388 |
| Solanum lycopersicum | SL4.0ch01 | 6 | CH_sly_441 | 4 | 7 | 0.00000411835 |
| Solanum lycopersicum | SL4.0ch10 | 6 | CH_sly_47 | 11 | 24 | 1.05406e-21 |
| Solanum lycopersicum | SL4.0ch06 | 6 | CH_sly_646 | 3 | 3 | 0.0000893795 |
| Solanum lycopersicum | SL4.0ch10 | 6 | CH_sly_647 | 3 | 3 | 0.0000893795 |
| Spirodela polyrhiza | pseudo3 | 6 | CH_spo_61 | 5 | 7 | 0.000000000105084 |
| Spirodela polyrhiza | pseudo22 | 6 | CH_spo_81 | 5 | 11 | 0.00000000230666 |
| Saccharum spontaneum | Chr7B | 6 | CH_ssp_177 | 5 | 5 | 0.00000000000263955 |
| Saccharum spontaneum | Chr7C | 6 | CH_ssp_248 | 5 | 8 | 0.000000000147638 |
| Saccharum spontaneum | Chr7A | 6 | CH_ssp_538 | 4 | 7 | 0.00000019337 |
| Setaria viridis | Chr_07 | 6 | CH_svi_250 | 4 | 4 | 0.00000000748007 |
| Setaria viridis | Chr_08 | 6 | CH_svi_283 | 4 | 5 | 0.0000000373814 |
| Triticum aestivum | Chr3B | 6 | CH_tae_10 | 19 | 19 | 2.04811e-51 |
| Triticum aestivum | Chr2B | 6 | CH_tae_1185 | 4 | 4 | 0.00000025218 |
| Triticum aestivum | Chr3A | 6 | CH_tae_2225 | 3 | 3 | 0.000205809 |
| Triticum aestivum | Chr5A | 6 | CH_tae_2616 | 3 | 4 | 0.000822473 |
| Triticum aestivum | Chr7B | 6 | CH_tae_2617 | 3 | 4 | 0.000822473 |
| Triticum aestivum | Chr7D | 6 | CH_tae_2618 | 3 | 4 | 0.000822473 |
| Triticum aestivum | Chr5D | 6 | CH_tae_2619 | 3 | 4 | 0.000822473 |
| Triticum aestivum | ChrUnknown | 6 | CH_tae_325 | 7 | 8 | 0.00000000000000354024 |
| Triticum turgidum | chr3B | 6 | CH_ttu_19 | 12 | 18 | 1.6827e-28 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00028.1 | 6 | CH_zjn_27 | 5 | 5 | 0.00000000000166857 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |