Functional clusters
Information
- Type Gene Ontology
- Description regulation of seed dormancy process
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 1D | 3 | CH_ata_144 | 3 | 3 | 0.000000600139 |
| Arabidopsis thaliana | Chr3 | 3 | CH_ath_282 | 4 | 5 | 0.00000319793 |
| Arabidopsis thaliana | Chr1 | 3 | CH_ath_321 | 5 | 18 | 0.00000918304 |
| Arabidopsis thaliana | Chr5 | 3 | CH_ath_638 | 4 | 16 | 0.000452287 |
| Cenchrus purpureus | GWHAORA00000007 | 3 | CH_cpu_287 | 5 | 37 | 0.0000000603336 |
| Digitaria exilis | Dexi_CM05836_chr05B | 3 | CH_dex_294 | 3 | 3 | 0.00000136712 |
| Panicum hallii | Chr05 | 3 | CH_pha_156 | 3 | 3 | 0.000000835799 |
| Populus trichocarpa | Chr16 | 3 | CH_ptr_89 | 7 | 26 | 0.000000000000148788 |
| Sorghum bicolor | Chr03 | 3 | CH_sbi_169 | 3 | 3 | 0.000000619571 |
| Secale cereale | GWHASIY00000001 | 3 | CH_sce_287 | 3 | 3 | 0.00000113183 |
| Triticum aestivum | Chr1D | 3 | CH_tae_698 | 3 | 3 | 0.0000012073 |
| Aegilops tauschii | 1D | 4 | CH_ata_144 | 3 | 3 | 0.000000600139 |
| Arabidopsis thaliana | Chr3 | 4 | CH_ath_282 | 4 | 5 | 0.00000319793 |
| Arabidopsis thaliana | Chr1 | 4 | CH_ath_321 | 5 | 18 | 0.00000918304 |
| Arabidopsis thaliana | Chr5 | 4 | CH_ath_638 | 4 | 16 | 0.000452287 |
| Cenchrus purpureus | GWHAORA00000007 | 4 | CH_cpu_287 | 5 | 37 | 0.0000000603336 |
| Digitaria exilis | Dexi_CM05836_chr05B | 4 | CH_dex_294 | 3 | 3 | 0.00000136712 |
| Panicum hallii | Chr05 | 4 | CH_pha_156 | 3 | 3 | 0.000000835799 |
| Populus trichocarpa | Chr16 | 4 | CH_ptr_89 | 7 | 26 | 0.000000000000148788 |
| Sorghum bicolor | Chr03 | 4 | CH_sbi_169 | 3 | 3 | 0.000000619571 |
| Secale cereale | GWHASIY00000001 | 4 | CH_sce_287 | 3 | 3 | 0.00000113183 |
| Triticum aestivum | Chr1D | 4 | CH_tae_698 | 3 | 3 | 0.0000012073 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |