Functional clusters

Information

  • Type Gene Ontology
  • Description ground tissue pattern formation

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr7_1 3 CH_asa_94 4 4 0.0000000000122232
Digitaria exilis Dexi_CM05836_chr06B 3 CH_dex_480 2 2 0.000100261
Miscanthus sinensis Chr07 3 CH_msi_327 2 2 0.0000321989
Oryza sativa ssp. indica Chr8 3 CH_osaindica_270 2 2 0.0000516609
Oryza sativa ssp. japonica chr08 3 CH_osa_325 2 4 0.000158433
Oropetium thomaeum Chromosome_9 3 CH_oth_23 4 8 0.0000000000757461
Sequoiadendron giganteum chr3 3 CH_sgi_308 4 6 0.00000000000520253
Spirodela polyrhiza pseudo17 3 CH_spo_149 2 2 0.000101921
Saccharum spontaneum Chr6C 3 CH_ssp_1063 2 5 0.000715726
Vanilla planifolia CM028150.1 3 CH_vpl_122 3 7 0.00000286525
Zea mays B73 6 3 CH_zma_200 2 2 0.0000511313
Zostera marina Chr01 3 CH_zosmarina_120 2 3 0.000289659
Allium sativum chr7_1 4 CH_asa_94 4 4 0.0000000000122232
Digitaria exilis Dexi_CM05836_chr06B 4 CH_dex_480 2 2 0.000100261
Miscanthus sinensis Chr07 4 CH_msi_327 2 2 0.0000321989
Oryza sativa ssp. indica Chr8 4 CH_osaindica_270 2 2 0.0000516609
Oryza sativa ssp. japonica chr08 4 CH_osa_325 2 4 0.000158433
Oropetium thomaeum Chromosome_9 4 CH_oth_23 4 8 0.0000000000757461
Sequoiadendron giganteum chr3 4 CH_sgi_308 4 6 0.00000000000520253
Spirodela polyrhiza pseudo17 4 CH_spo_149 2 2 0.000101921
Saccharum spontaneum Chr6C 4 CH_ssp_1063 2 5 0.000715726
Vanilla planifolia CM028150.1 4 CH_vpl_122 3 7 0.00000286525
Zea mays B73 6 4 CH_zma_200 2 2 0.0000511313
Zostera marina Chr01 4 CH_zosmarina_120 2 3 0.000289659

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001