Functional clusters
Information
- Type Gene Ontology
- Description mitochondrial protein-containing complex
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Aegilops tauschii | 5D | 3 | CH_ata_119 | 7 | 12 | 0.0000000989284 |
| Aegilops tauschii | 4D | 3 | CH_ata_15 | 19 | 70 | 5.60694e-19 |
| Aegilops tauschii | 6D | 3 | CH_ata_40 | 9 | 12 | 0.00000000000195976 |
| Ceratophyllum demersum | 1 | 3 | CH_cde_5 | 18 | 80 | 6.1832e-19 |
| Cenchrus purpureus | GWHAORA00000004 | 3 | CH_cpu_854 | 4 | 6 | 0.000466498 |
| Dioscorea dumetorum | contig509 | 3 | CH_ddu_13 | 14 | 27 | 4.33998e-21 |
| Dioscorea dumetorum | contig520 | 3 | CH_ddu_18 | 14 | 31 | 5.63397e-20 |
| Hordeum vulgare | chr3H | 3 | CH_hvu_151 | 5 | 5 | 0.0000000834779 |
| Hordeum vulgare | chr1H | 3 | CH_hvu_190 | 6 | 14 | 0.00000106144 |
| Hordeum vulgare | chrUn | 3 | CH_hvu_208 | 9 | 73 | 0.00000222807 |
| Hordeum vulgare | chrUn | 3 | CH_hvu_210 | 9 | 74 | 0.00000252676 |
| Musa acuminata | mito3 | 3 | CH_mac_37 | 8 | 14 | 0.000000000202023 |
| Magnolia biondii | Chr05 | 3 | CH_mbi_160 | 7 | 22 | 0.0000000151558 |
| Oryza sativa ssp. indica | Chr6 | 3 | CH_osaindica_123 | 8 | 41 | 0.000000106037 |
| Oryza sativa ssp. indica | chrM | 3 | CH_osaindica_2 | 21 | 77 | 3.15583e-29 |
| Oryza sativa Kitaake | Chr12 | 3 | CH_osak_37 | 10 | 17 | 0.00000000000000109358 |
| Oropetium thomaeum | contig_164 | 3 | CH_oth_41 | 10 | 55 | 0.0000000346399 |
| Oropetium thomaeum | contig_163 | 3 | CH_oth_60 | 8 | 33 | 0.000000546525 |
| Oropetium thomaeum | contig_166 | 3 | CH_oth_79 | 7 | 27 | 0.00000615129 |
| Secale cereale | GWHASIY00000007 | 3 | CH_sce_657 | 4 | 5 | 0.000309648 |
| Secale cereale | GWHASIY00000004 | 3 | CH_sce_801 | 4 | 6 | 0.000924407 |
| Setaria italica | scaffold_12 | 3 | CH_sit_8 | 21 | 49 | 6.86316e-32 |
| Setaria viridis | Chr_01 | 3 | CH_svi_38 | 11 | 27 | 0.00000000000000386515 |
| Triticum aestivum | Chr7D | 3 | CH_tae_1137 | 4 | 4 | 0.0001871 |
| Triticum aestivum | Chr7B | 3 | CH_tae_1191 | 6 | 20 | 0.000278362 |
| Triticum aestivum | Chr1A | 3 | CH_tae_1441 | 4 | 5 | 0.000930671 |
| Triticum aestivum | Chr7A | 3 | CH_tae_171 | 11 | 21 | 0.0000000000000278725 |
| Triticum aestivum | Chr7B | 3 | CH_tae_442 | 8 | 18 | 0.0000000132226 |
| Triticum aestivum | Chr3B | 3 | CH_tae_497 | 6 | 7 | 0.0000000540178 |
| Triticum aestivum | Chr2B | 3 | CH_tae_573 | 6 | 8 | 0.000000214879 |
| Triticum aestivum | Chr6B | 3 | CH_tae_603 | 8 | 25 | 0.000000314005 |
| Triticum dicoccoides | 1B | 3 | CH_tdi_250 | 5 | 5 | 0.00000119854 |
| Triticum dicoccoides | 2B | 3 | CH_tdi_466 | 5 | 9 | 0.000147497 |
| Triticum dicoccoides | 1B | 3 | CH_tdi_633 | 4 | 5 | 0.000845158 |
| Triticum dicoccoides | 4B | 3 | CH_tdi_84 | 10 | 22 | 0.0000000000121224 |
| Triticum turgidum | chr6B | 3 | CH_ttu_226 | 11 | 64 | 0.0000000491376 |
| Triticum turgidum | chr1B | 3 | CH_ttu_256 | 6 | 8 | 0.000000180857 |
| Triticum turgidum | chr1B | 3 | CH_ttu_288 | 6 | 9 | 0.000000539408 |
| Triticum turgidum | chr5B | 3 | CH_ttu_308 | 5 | 5 | 0.000000961325 |
| Triticum turgidum | chr1B | 3 | CH_ttu_469 | 5 | 9 | 0.0000529221 |
| Triticum turgidum | chr5B | 3 | CH_ttu_470 | 5 | 8 | 0.0000529221 |
| Triticum turgidum | chr3B | 3 | CH_ttu_521 | 4 | 4 | 0.00014109 |
| Triticum turgidum | chr2B | 3 | CH_ttu_569 | 5 | 10 | 0.000235453 |
| Zea mays B104 | scaffold9.1209 | 3 | CH_zma-b104_10 | 7 | 16 | 0.0000000590273 |
| Aegilops tauschii | 5D | 4 | CH_ata_119 | 7 | 12 | 0.0000000989284 |
| Aegilops tauschii | 4D | 4 | CH_ata_15 | 19 | 70 | 5.60694e-19 |
| Aegilops tauschii | 6D | 4 | CH_ata_40 | 9 | 12 | 0.00000000000195976 |
| Ceratophyllum demersum | 1 | 4 | CH_cde_5 | 18 | 80 | 6.1832e-19 |
| Cenchrus purpureus | GWHAORA00000004 | 4 | CH_cpu_854 | 4 | 6 | 0.000466498 |
| Dioscorea dumetorum | contig509 | 4 | CH_ddu_13 | 14 | 27 | 4.33998e-21 |
| Dioscorea dumetorum | contig520 | 4 | CH_ddu_18 | 14 | 31 | 5.63397e-20 |
| Hordeum vulgare | chr3H | 4 | CH_hvu_151 | 5 | 5 | 0.0000000834779 |
| Hordeum vulgare | chr1H | 4 | CH_hvu_190 | 6 | 14 | 0.00000106144 |
| Hordeum vulgare | chrUn | 4 | CH_hvu_208 | 9 | 73 | 0.00000222807 |
| Hordeum vulgare | chrUn | 4 | CH_hvu_210 | 9 | 74 | 0.00000252676 |
| Musa acuminata | mito3 | 4 | CH_mac_37 | 8 | 14 | 0.000000000202023 |
| Magnolia biondii | Chr05 | 4 | CH_mbi_160 | 7 | 22 | 0.0000000151558 |
| Oryza sativa ssp. indica | Chr6 | 4 | CH_osaindica_123 | 8 | 41 | 0.000000106037 |
| Oryza sativa ssp. indica | chrM | 4 | CH_osaindica_2 | 21 | 77 | 3.15583e-29 |
| Oryza sativa Kitaake | Chr12 | 4 | CH_osak_37 | 10 | 17 | 0.00000000000000109358 |
| Oropetium thomaeum | contig_164 | 4 | CH_oth_41 | 10 | 55 | 0.0000000346399 |
| Oropetium thomaeum | contig_163 | 4 | CH_oth_60 | 8 | 33 | 0.000000546525 |
| Oropetium thomaeum | contig_166 | 4 | CH_oth_79 | 7 | 27 | 0.00000615129 |
| Secale cereale | GWHASIY00000007 | 4 | CH_sce_657 | 4 | 5 | 0.000309648 |
| Secale cereale | GWHASIY00000004 | 4 | CH_sce_801 | 4 | 6 | 0.000924407 |
| Setaria italica | scaffold_12 | 4 | CH_sit_8 | 21 | 49 | 6.86316e-32 |
| Setaria viridis | Chr_01 | 4 | CH_svi_38 | 11 | 27 | 0.00000000000000386515 |
| Triticum aestivum | Chr7D | 4 | CH_tae_1137 | 4 | 4 | 0.0001871 |
| Triticum aestivum | Chr7B | 4 | CH_tae_1191 | 6 | 20 | 0.000278362 |
| Triticum aestivum | Chr1A | 4 | CH_tae_1441 | 4 | 5 | 0.000930671 |
| Triticum aestivum | Chr7A | 4 | CH_tae_171 | 11 | 21 | 0.0000000000000278725 |
| Triticum aestivum | Chr7B | 4 | CH_tae_442 | 8 | 18 | 0.0000000132226 |
| Triticum aestivum | Chr3B | 4 | CH_tae_497 | 6 | 7 | 0.0000000540178 |
| Triticum aestivum | Chr2B | 4 | CH_tae_573 | 6 | 8 | 0.000000214879 |
| Triticum aestivum | Chr6B | 4 | CH_tae_603 | 8 | 25 | 0.000000314005 |
| Triticum dicoccoides | 1B | 4 | CH_tdi_250 | 5 | 5 | 0.00000119854 |
| Triticum dicoccoides | 2B | 4 | CH_tdi_466 | 5 | 9 | 0.000147497 |
| Triticum dicoccoides | 1B | 4 | CH_tdi_633 | 4 | 5 | 0.000845158 |
| Triticum dicoccoides | 4B | 4 | CH_tdi_84 | 10 | 22 | 0.0000000000121224 |
| Triticum turgidum | chr6B | 4 | CH_ttu_226 | 11 | 64 | 0.0000000491376 |
| Triticum turgidum | chr1B | 4 | CH_ttu_256 | 6 | 8 | 0.000000180857 |
| Triticum turgidum | chr1B | 4 | CH_ttu_288 | 6 | 9 | 0.000000539408 |
| Triticum turgidum | chr5B | 4 | CH_ttu_308 | 5 | 5 | 0.000000961325 |
| Triticum turgidum | chr1B | 4 | CH_ttu_469 | 5 | 9 | 0.0000529221 |
| Triticum turgidum | chr5B | 4 | CH_ttu_470 | 5 | 8 | 0.0000529221 |
| Triticum turgidum | chr3B | 4 | CH_ttu_521 | 4 | 4 | 0.00014109 |
| Triticum turgidum | chr2B | 4 | CH_ttu_569 | 5 | 10 | 0.000235453 |
| Zea mays B104 | scaffold9.1209 | 4 | CH_zma-b104_10 | 7 | 16 | 0.0000000590273 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0000275 | mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1) | 2 |
| GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | 8 |
| GO:0001401 | SAM complex | 2 |
| GO:0005742 | mitochondrial outer membrane translocase complex | 2 |
| GO:0005744 | TIM23 mitochondrial import inner membrane translocase complex | 22 |
| GO:0005747 | mitochondrial respiratory chain complex I | 4 |
| GO:0005749 | mitochondrial respiratory chain complex II, succinate dehydrogenase complex (ubiquinone) | 4 |
| GO:0005753 | mitochondrial proton-transporting ATP synthase complex | 2 |
| GO:0005754 | mitochondrial proton-transporting ATP synthase, catalytic core | 4 |
| GO:0005762 | mitochondrial large ribosomal subunit | 2 |
| GO:0005763 | mitochondrial small ribosomal subunit | 6 |
| GO:0034245 | mitochondrial DNA-directed RNA polymerase complex | 2 |
| GO:0042720 | mitochondrial inner membrane peptidase complex | 12 |
| GO:0042721 | TIM22 mitochondrial import inner membrane insertion complex | 4 |
| GO:0045025 | mitochondrial degradosome | 2 |
| GO:0098800 | inner mitochondrial membrane protein complex | 20 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |