Functional clusters
Information
- Type Gene Ontology
- Description gene silencing by RNA-directed DNA methylation
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Populus trichocarpa | Chr10 | 3 | CH_ptr_313 | 4 | 14 | 0.0000338994 |
| Setaria italica | scaffold_9 | 3 | CH_sit_261 | 4 | 10 | 0.0000305831 |
| Solanum lycopersicum | SL4.0ch08 | 3 | CH_sly_18 | 15 | 68 | 4.23487e-24 |
| Solanum lycopersicum | SL4.0ch08 | 3 | CH_sly_21 | 10 | 13 | 7.21614e-22 |
| Setaria viridis | Chr_09 | 3 | CH_svi_278 | 5 | 35 | 0.0000269184 |
| Triticum dicoccoides | 5B | 3 | CH_tdi_253 | 4 | 5 | 0.00000135806 |
| Populus trichocarpa | Chr10 | 4 | CH_ptr_313 | 4 | 14 | 0.0000338994 |
| Setaria italica | scaffold_9 | 4 | CH_sit_261 | 4 | 10 | 0.0000305831 |
| Solanum lycopersicum | SL4.0ch08 | 4 | CH_sly_18 | 15 | 68 | 4.23487e-24 |
| Solanum lycopersicum | SL4.0ch08 | 4 | CH_sly_21 | 10 | 13 | 7.21614e-22 |
| Setaria viridis | Chr_09 | 4 | CH_svi_278 | 5 | 35 | 0.0000269184 |
| Triticum dicoccoides | 5B | 4 | CH_tdi_253 | 4 | 5 | 0.00000135806 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |