Functional clusters
Information
- Type Gene Ontology
- Description trihydroxyferuloyl spermidine O-methyltransferase activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_02 | 3 | CH_aof_14 | 4 | 20 | 0.00000000627511 |
| Brachypodium distachyon | Bd3 | 3 | CH_bdi_47 | 4 | 5 | 0.0000000000527663 |
| Dioscorea dumetorum | contig678 | 3 | CH_ddu_188 | 2 | 2 | 0.000207268 |
| Eragrostis curvula | Contig50 | 3 | CH_ecu_15 | 11 | 15 | 5.05781e-33 |
| Elaeis guineensis | EG5.1_Chr9 | 3 | CH_egu_17 | 4 | 4 | 0.0000000000382627 |
| Glycine max | Gm08 | 3 | CH_gma_322 | 2 | 2 | 0.0000379557 |
| Miscanthus sinensis | Chr10 | 3 | CH_msi_188 | 3 | 3 | 0.000000342138 |
| Miscanthus sinensis | Chr13 | 3 | CH_msi_241 | 3 | 5 | 0.00000342053 |
| Oryza alta | GWHAZTO00000008 | 3 | CH_oal_273 | 3 | 5 | 0.00000100491 |
| Oryza sativa ssp. indica | Chr8 | 3 | CH_osaindica_94 | 3 | 3 | 0.0000000160135 |
| Oryza sativa Kitaake | Chr8 | 3 | CH_osak_158 | 3 | 3 | 0.0000000475225 |
| Oryza sativa ssp. japonica | chr08 | 3 | CH_osa_126 | 3 | 3 | 0.0000000418381 |
| Panicum hallii | Chr06 | 3 | CH_pha_118 | 3 | 4 | 0.000000081043 |
| Sorghum bicolor | Chr07 | 3 | CH_sbi_161 | 3 | 5 | 0.000000516234 |
| Sequoiadendron giganteum | chr10 | 3 | CH_sgi_541 | 4 | 14 | 0.0000000242791 |
| Saccharum spontaneum | Chr6D | 3 | CH_ssp_327 | 3 | 3 | 0.00000131498 |
| Saccharum spontaneum | Chr6A | 3 | CH_ssp_449 | 4 | 31 | 0.00000933207 |
| Saccharum spontaneum | Chr6B | 3 | CH_ssp_58 | 6 | 17 | 0.000000000000160342 |
| Vanilla planifolia | CM028160.1 | 3 | CH_vpl_11 | 7 | 23 | 1.12973e-16 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00015.1 | 3 | CH_zjn_48 | 3 | 4 | 0.000000164359 |
| Asparagus officinalis | AsparagusV1_02 | 4 | CH_aof_14 | 4 | 20 | 0.00000000627511 |
| Brachypodium distachyon | Bd3 | 4 | CH_bdi_47 | 4 | 5 | 0.0000000000527663 |
| Dioscorea dumetorum | contig678 | 4 | CH_ddu_188 | 2 | 2 | 0.000207268 |
| Eragrostis curvula | Contig50 | 4 | CH_ecu_15 | 11 | 15 | 5.05781e-33 |
| Elaeis guineensis | EG5.1_Chr9 | 4 | CH_egu_17 | 4 | 4 | 0.0000000000382627 |
| Glycine max | Gm08 | 4 | CH_gma_322 | 2 | 2 | 0.0000379557 |
| Miscanthus sinensis | Chr10 | 4 | CH_msi_188 | 3 | 3 | 0.000000342138 |
| Miscanthus sinensis | Chr13 | 4 | CH_msi_241 | 3 | 5 | 0.00000342053 |
| Oryza alta | GWHAZTO00000008 | 4 | CH_oal_273 | 3 | 5 | 0.00000100491 |
| Oryza sativa ssp. indica | Chr8 | 4 | CH_osaindica_94 | 3 | 3 | 0.0000000160135 |
| Oryza sativa Kitaake | Chr8 | 4 | CH_osak_158 | 3 | 3 | 0.0000000475225 |
| Oryza sativa ssp. japonica | chr08 | 4 | CH_osa_126 | 3 | 3 | 0.0000000418381 |
| Panicum hallii | Chr06 | 4 | CH_pha_118 | 3 | 4 | 0.000000081043 |
| Sorghum bicolor | Chr07 | 4 | CH_sbi_161 | 3 | 5 | 0.000000516234 |
| Sequoiadendron giganteum | chr10 | 4 | CH_sgi_541 | 4 | 14 | 0.0000000242791 |
| Saccharum spontaneum | Chr6D | 4 | CH_ssp_327 | 3 | 3 | 0.00000131498 |
| Saccharum spontaneum | Chr6A | 4 | CH_ssp_449 | 4 | 31 | 0.00000933207 |
| Saccharum spontaneum | Chr6B | 4 | CH_ssp_58 | 6 | 17 | 0.000000000000160342 |
| Vanilla planifolia | CM028160.1 | 4 | CH_vpl_11 | 7 | 23 | 1.12973e-16 |
| Zoysia japonica ssp. nagirizaki | Zjn_sc00015.1 | 4 | CH_zjn_48 | 3 | 4 | 0.000000164359 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |