Functional clusters

Information

  • Type Gene Ontology
  • Description cellular protein catabolic process

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Arabidopsis thaliana Chr1 3 CH_ath_170 7 8 0.000000044966
Arabidopsis thaliana Chr1 4 CH_ath_170 7 8 0.000000044966

Available child term results

Ontology identifier Description Number of clusters
GO:0006511 ubiquitin-dependent protein catabolic process 114
GO:0006515 protein quality control for misfolded or incompletely synthesized proteins 2
GO:0019941 modification-dependent protein catabolic process 2
GO:0030327 prenylated protein catabolic process 4
GO:0030433 ubiquitin-dependent ERAD pathway 2
GO:0031145 anaphase-promoting complex-dependent catabolic process 2
GO:0031146 SCF-dependent proteasomal ubiquitin-dependent protein catabolic process 2
GO:0043162 ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway 2
GO:0043328 protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway 4
GO:0071596 ubiquitin-dependent protein catabolic process via the N-end rule pathway 10
GO:0071629 cytoplasm protein quality control by the ubiquitin-proteasome system 8
GO:0071712 ER-associated misfolded protein catabolic process 4
GO:1901799 negative regulation of proteasomal protein catabolic process 6
GO:1904292 regulation of ERAD pathway 4
GO:1904294 positive regulation of ERAD pathway 8
GO:1990116 ribosome-associated ubiquitin-dependent protein catabolic process 8

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001