Functional clusters

Information

  • Type Gene Ontology
  • Description ncRNA processing

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Cenchrus purpureus GWHAORA00000013 3 CH_cpu_925 6 46 0.000759656
Cenchrus purpureus GWHAORA00000013 4 CH_cpu_925 6 46 0.000759656

Available child term results

Ontology identifier Description Number of clusters
GO:0000154 rRNA modification 12
GO:0000453 enzyme-directed rRNA 2'-O-methylation 2
GO:0000461 endonucleolytic cleavage to generate mature 3'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2
GO:0000462 maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2
GO:0000463 maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 2
GO:0000467 exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) 12
GO:0000469 cleavage involved in rRNA processing 2
GO:0000476 maturation of 4.5S rRNA 2
GO:0000495 box H/ACA RNA 3'-end processing 2
GO:0002100 tRNA wobble adenosine to inosine editing 2
GO:0002940 tRNA N2-guanine methylation 2
GO:0002943 tRNA dihydrouridine synthesis 6
GO:0002949 tRNA threonylcarbamoyladenosine modification 4
GO:0006364 rRNA processing 8
GO:0006400 tRNA modification 4
GO:0008033 tRNA processing 2
GO:0016180 snRNA processing 6
GO:0019988 charged-tRNA amino acid modification 2
GO:0030488 tRNA methylation 2
GO:0031054 pre-miRNA processing 4
GO:0031119 tRNA pseudouridine synthesis 2
GO:0034227 tRNA thio-modification 4
GO:0034414 tRNA 3'-trailer cleavage, endonucleolytic 6
GO:0034472 snRNA 3'-end processing 4
GO:0034477 U6 snRNA 3'-end processing 4
GO:0043144 sno(s)RNA processing 2
GO:0070476 rRNA (guanine-N7)-methylation 2
GO:0101030 tRNA-guanine transglycosylation 2
GO:2000232 regulation of rRNA processing 4
GO:2000234 positive regulation of rRNA processing 6

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001