Functional clusters
Information
- Type Gene Ontology
- Description ribonuclease T2 activity
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Asparagus officinalis | AsparagusV1_03 | 3 | CH_aof_165 | 2 | 2 | 0.000755915 |
| Amborella trichopoda | AmTr_v1.0_scaffold00064 | 3 | CH_atr_49 | 4 | 4 | 0.0000000000225629 |
| Brachypodium distachyon | Bd2 | 3 | CH_bdi_273 | 2 | 2 | 0.000370005 |
| Cenchrus purpureus | GWHAORA00000007 | 3 | CH_cpu_115 | 6 | 14 | 0.000000000000717039 |
| Cenchrus purpureus | GWHAORA00000010 | 3 | CH_cpu_208 | 4 | 4 | 0.00000000181478 |
| Cenchrus purpureus | GWHAORA00000002 | 3 | CH_cpu_56 | 8 | 23 | 1.29002e-17 |
| Digitaria exilis | Dexi_CM05836_chr02A | 3 | CH_dex_293 | 3 | 3 | 0.00000136712 |
| Digitaria exilis | Dexi_CM05836_chr05B | 3 | CH_dex_341 | 3 | 4 | 0.00000546737 |
| Digitaria exilis | Dexi_CM05836_chr02B | 3 | CH_dex_374 | 3 | 5 | 0.0000136656 |
| Eragrostis curvula | 4 | 3 | CH_ecu_116 | 6 | 10 | 0.000000000000122397 |
| Hordeum vulgare | chr1H | 3 | CH_hvu_97 | 4 | 6 | 0.000000000992403 |
| Musa acuminata | chr09 | 3 | CH_mac_22 | 5 | 5 | 0.0000000000000361182 |
| Magnolia biondii | Chr04 | 3 | CH_mbi_133 | 4 | 4 | 0.00000000205692 |
| Magnolia biondii | Chr07 | 3 | CH_mbi_227 | 4 | 9 | 0.000000258712 |
| Magnolia biondii | Chr07 | 3 | CH_mbi_244 | 4 | 11 | 0.000000431034 |
| Magnolia biondii | Chr05 | 3 | CH_mbi_332 | 4 | 18 | 0.00000626299 |
| Magnolia biondii | Chr01 | 3 | CH_mbi_82 | 5 | 7 | 0.0000000000178204 |
| Oryza alta | GWHAZTO00000001 | 3 | CH_oal_242 | 3 | 3 | 0.000000414202 |
| Oryza alta | GWHAZTO00000007 | 3 | CH_oal_302 | 3 | 4 | 0.00000165662 |
| Oryza brachyantha | 9 | 3 | CH_obr_312 | 2 | 2 | 0.000896004 |
| Oryza sativa ssp. indica | Chr1 | 3 | CH_osaindica_388 | 2 | 2 | 0.000774913 |
| Oryza sativa ssp. japonica | chr07 | 3 | CH_osa_182 | 3 | 4 | 0.00000140556 |
| Phyllostachys edulis | hic_scaffold_3 | 3 | CH_ped_175 | 3 | 3 | 0.00000054788 |
| Panicum hallii | Chr02 | 3 | CH_pha_171 | 3 | 4 | 0.00000170172 |
| Secale cereale | GWHASIY00000002 | 3 | CH_sce_339 | 3 | 5 | 0.00000373023 |
| Solanum lycopersicum | SL4.0ch07 | 3 | CH_sly_208 | 3 | 3 | 0.000000852661 |
| Selaginella moellendorffii | scaffold_6 | 3 | CH_smo_153 | 2 | 2 | 0.000280112 |
| Spirodela polyrhiza | pseudo4 | 3 | CH_spo_209 | 2 | 2 | 0.000611527 |
| Setaria viridis | Chr_02 | 3 | CH_svi_193 | 3 | 4 | 0.000000914701 |
| Triticum aestivum | Chr2D | 3 | CH_tae_711 | 3 | 3 | 0.00000136477 |
| Zea mays B73 | 3 | 3 | CH_zma_351 | 2 | 2 | 0.000766969 |
| Zostera marina | Chr05 | 3 | CH_zosmarina_85 | 3 | 10 | 0.000033529 |
| Asparagus officinalis | AsparagusV1_03 | 4 | CH_aof_165 | 2 | 2 | 0.000755915 |
| Amborella trichopoda | AmTr_v1.0_scaffold00064 | 4 | CH_atr_49 | 4 | 4 | 0.0000000000225629 |
| Brachypodium distachyon | Bd2 | 4 | CH_bdi_273 | 2 | 2 | 0.000370005 |
| Cenchrus purpureus | GWHAORA00000007 | 4 | CH_cpu_115 | 6 | 14 | 0.000000000000717039 |
| Cenchrus purpureus | GWHAORA00000010 | 4 | CH_cpu_208 | 4 | 4 | 0.00000000181478 |
| Cenchrus purpureus | GWHAORA00000002 | 4 | CH_cpu_56 | 8 | 23 | 1.29002e-17 |
| Digitaria exilis | Dexi_CM05836_chr02A | 4 | CH_dex_293 | 3 | 3 | 0.00000136712 |
| Digitaria exilis | Dexi_CM05836_chr05B | 4 | CH_dex_341 | 3 | 4 | 0.00000546737 |
| Digitaria exilis | Dexi_CM05836_chr02B | 4 | CH_dex_374 | 3 | 5 | 0.0000136656 |
| Eragrostis curvula | 4 | 4 | CH_ecu_116 | 6 | 10 | 0.000000000000122397 |
| Hordeum vulgare | chr1H | 4 | CH_hvu_97 | 4 | 6 | 0.000000000992403 |
| Musa acuminata | chr09 | 4 | CH_mac_22 | 5 | 5 | 0.0000000000000361182 |
| Magnolia biondii | Chr04 | 4 | CH_mbi_133 | 4 | 4 | 0.00000000205692 |
| Magnolia biondii | Chr07 | 4 | CH_mbi_227 | 4 | 9 | 0.000000258712 |
| Magnolia biondii | Chr07 | 4 | CH_mbi_244 | 4 | 11 | 0.000000431034 |
| Magnolia biondii | Chr05 | 4 | CH_mbi_332 | 4 | 18 | 0.00000626299 |
| Magnolia biondii | Chr01 | 4 | CH_mbi_82 | 5 | 7 | 0.0000000000178204 |
| Oryza alta | GWHAZTO00000001 | 4 | CH_oal_242 | 3 | 3 | 0.000000414202 |
| Oryza alta | GWHAZTO00000007 | 4 | CH_oal_302 | 3 | 4 | 0.00000165662 |
| Oryza brachyantha | 9 | 4 | CH_obr_312 | 2 | 2 | 0.000896004 |
| Oryza sativa ssp. indica | Chr1 | 4 | CH_osaindica_388 | 2 | 2 | 0.000774913 |
| Oryza sativa ssp. japonica | chr07 | 4 | CH_osa_182 | 3 | 4 | 0.00000140556 |
| Phyllostachys edulis | hic_scaffold_3 | 4 | CH_ped_175 | 3 | 3 | 0.00000054788 |
| Panicum hallii | Chr02 | 4 | CH_pha_171 | 3 | 4 | 0.00000170172 |
| Secale cereale | GWHASIY00000002 | 4 | CH_sce_339 | 3 | 5 | 0.00000373023 |
| Solanum lycopersicum | SL4.0ch07 | 4 | CH_sly_208 | 3 | 3 | 0.000000852661 |
| Selaginella moellendorffii | scaffold_6 | 4 | CH_smo_153 | 2 | 2 | 0.000280112 |
| Spirodela polyrhiza | pseudo4 | 4 | CH_spo_209 | 2 | 2 | 0.000611527 |
| Setaria viridis | Chr_02 | 4 | CH_svi_193 | 3 | 4 | 0.000000914701 |
| Triticum aestivum | Chr2D | 4 | CH_tae_711 | 3 | 3 | 0.00000136477 |
| Zea mays B73 | 3 | 4 | CH_zma_351 | 2 | 2 | 0.000766969 |
| Zostera marina | Chr05 | 4 | CH_zosmarina_85 | 3 | 10 | 0.000033529 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |