Functional clusters
Information
- Type Gene Ontology
- Description production of siRNA involved in RNA interference
Cluster overview
| Species | Chromosome | Experiment | Cluster id | Cluster size | Number of genes | E-value |
|---|---|---|---|---|---|---|
| Cenchrus purpureus | GWHAORA00000009 | 3 | CH_cpu_670 | 3 | 3 | 0.0000929264 |
| Digitaria exilis | Dexi_CM05836_chr05B | 3 | CH_dex_446 | 3 | 3 | 0.0000698037 |
| Lolium perenne | Lp_chr3_0 | 3 | CH_lpe_137 | 4 | 5 | 0.0000000887998 |
| Oryza alta | GWHAZTO00000001 | 3 | CH_oal_507 | 3 | 4 | 0.000111439 |
| Oryza sativa Kitaake | Chr1 | 3 | CH_osak_218 | 4 | 7 | 0.00000209033 |
| Oryza sativa ssp. japonica | chr01 | 3 | CH_osa_197 | 4 | 7 | 0.0000025172 |
| Panicum hallii | Chr05 | 3 | CH_pha_233 | 3 | 3 | 0.0000393585 |
| Sorghum bicolor | Chr03 | 3 | CH_sbi_299 | 3 | 3 | 0.00006838 |
| Setaria italica | scaffold_5 | 3 | CH_sit_309 | 3 | 3 | 0.0000669311 |
| Setaria viridis | Chr_05 | 3 | CH_svi_289 | 3 | 3 | 0.0000468842 |
| Triticum aestivum | Chr3B | 3 | CH_tae_1283 | 3 | 4 | 0.000404767 |
| Cenchrus purpureus | GWHAORA00000009 | 4 | CH_cpu_670 | 3 | 3 | 0.0000929264 |
| Digitaria exilis | Dexi_CM05836_chr05B | 4 | CH_dex_446 | 3 | 3 | 0.0000698037 |
| Lolium perenne | Lp_chr3_0 | 4 | CH_lpe_137 | 4 | 5 | 0.0000000887998 |
| Oryza alta | GWHAZTO00000001 | 4 | CH_oal_507 | 3 | 4 | 0.000111439 |
| Oryza sativa Kitaake | Chr1 | 4 | CH_osak_218 | 4 | 7 | 0.00000209033 |
| Oryza sativa ssp. japonica | chr01 | 4 | CH_osa_197 | 4 | 7 | 0.0000025172 |
| Panicum hallii | Chr05 | 4 | CH_pha_233 | 3 | 3 | 0.0000393585 |
| Sorghum bicolor | Chr03 | 4 | CH_sbi_299 | 3 | 3 | 0.00006838 |
| Setaria italica | scaffold_5 | 4 | CH_sit_309 | 3 | 3 | 0.0000669311 |
| Setaria viridis | Chr_05 | 4 | CH_svi_289 | 3 | 3 | 0.0000468842 |
| Triticum aestivum | Chr3B | 4 | CH_tae_1283 | 3 | 4 | 0.000404767 |
Available child term results
| Ontology identifier | Description | Number of clusters |
|---|---|---|
| GO:0090065 | regulation of production of siRNA involved in RNA interference | 2 |
Functional Clusters Experiments
| Exp id | Data type | Data filter | Min genes cluster | Max genes cluster | Max cluster size | E-value | Tandems removal |
|---|---|---|---|---|---|---|---|
| 1 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 2 | MapMan | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 3 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 4 | GO | All GO data. | 2 | 30 | 80 | 0.001 | |
| 5 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 | |
| 6 | InterPro | No filter applied. | 2 | 30 | 80 | 0.001 |