Functional clusters

Information

  • Type Gene Ontology
  • Description CCR4-NOT core complex

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr5 3 CH_asa_246 3 3 0.000000270338
Ceratophyllum demersum 9 3 CH_cde_20 4 4 0.000000000731682
Ceratophyllum demersum 2 3 CH_cde_58 3 3 0.00000205855
Oryza sativa ssp. japonica chr03 3 CH_osa_206 3 3 0.00000405411
Sequoiadendron giganteum chr10 3 CH_sgi_1324 2 2 0.000730727
Sequoiadendron giganteum chr3 3 CH_sgi_666 3 4 0.000000284764
Solanum lycopersicum SL4.0ch05 3 CH_sly_296 3 4 0.0000235549
Solanum lycopersicum SL4.0ch07 3 CH_sly_53 6 8 0.0000000000000170016
Saccharum spontaneum Chr7A 3 CH_ssp_353 3 4 0.00000191246
Zea mays B104 scaffold9.2511 3 CH_zma-b104_22 3 4 0.0000111435
Allium sativum chr5 4 CH_asa_246 3 3 0.000000270338
Ceratophyllum demersum 9 4 CH_cde_20 4 4 0.000000000731682
Ceratophyllum demersum 2 4 CH_cde_58 3 3 0.00000205855
Oryza sativa ssp. japonica chr03 4 CH_osa_206 3 3 0.00000405411
Sequoiadendron giganteum chr10 4 CH_sgi_1324 2 2 0.000730727
Sequoiadendron giganteum chr3 4 CH_sgi_666 3 4 0.000000284764
Solanum lycopersicum SL4.0ch05 4 CH_sly_296 3 4 0.0000235549
Solanum lycopersicum SL4.0ch07 4 CH_sly_53 6 8 0.0000000000000170016
Saccharum spontaneum Chr7A 4 CH_ssp_353 3 4 0.00000191246
Zea mays B104 scaffold9.2511 4 CH_zma-b104_22 3 4 0.0000111435

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001