Functional clusters

Information

  • Type Gene Ontology
  • Description regulation of proton transport

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Dioscorea dumetorum contig823 3 CH_ddu_261 2 2 0.000690894
Dioscorea dumetorum contig390 3 CH_ddu_262 2 2 0.000690894
Oryza brachyantha 8 3 CH_obr_243 2 2 0.000179201
Panicum hallii Chr02 3 CH_pha_381 2 3 0.000522972
Sorghum bicolor Chr02 3 CH_sbi_330 2 2 0.000176005
Sequoiadendron giganteum chr3 3 CH_sgi_999 2 2 0.0000487151
Setaria italica scaffold_2 3 CH_sit_344 2 2 0.00017413
Saccharum spontaneum Chr2B 3 CH_ssp_790 2 2 0.000238589
Setaria viridis Chr_02 3 CH_svi_363 2 2 0.000156535
Dioscorea dumetorum contig823 4 CH_ddu_261 2 2 0.000690894
Dioscorea dumetorum contig390 4 CH_ddu_262 2 2 0.000690894
Oryza brachyantha 8 4 CH_obr_243 2 2 0.000179201
Panicum hallii Chr02 4 CH_pha_381 2 3 0.000522972
Sorghum bicolor Chr02 4 CH_sbi_330 2 2 0.000176005
Sequoiadendron giganteum chr3 4 CH_sgi_999 2 2 0.0000487151
Setaria italica scaffold_2 4 CH_sit_344 2 2 0.00017413
Saccharum spontaneum Chr2B 4 CH_ssp_790 2 2 0.000238589
Setaria viridis Chr_02 4 CH_svi_363 2 2 0.000156535

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001