Functional clusters

Information

  • Type MapMan
  • Description Protein biosynthesis.translation elongation.eEF1 aminoacyl-tRNA binding factor activity.eEF1B eEF1A-GDP-recycling complex.component eEF1B-beta/-delta

Cluster overview

Species Chromosome Experiment Cluster id Cluster size Number of genes E-value
Allium sativum chr8 1 CH_asa_133 4 8 0.00000000604699
Amborella trichopoda AmTr_v1.0_scaffold00038 1 CH_atr_249 2 2 0.000238322
Cenchrus purpureus GWHAORA00000002 1 CH_cpu_872 2 2 0.000865587
Cenchrus purpureus GWHAORA00000010 1 CH_cpu_873 2 2 0.000865587
Digitaria exilis Dexi_CM05836_chr02A 1 CH_dex_692 2 2 0.000701825
Hordeum vulgare chr6H 1 CH_hvu_447 2 3 0.00073047
Oryza alta GWHAZTO00000015 1 CH_oal_176 3 4 0.000000136437
Sequoiadendron giganteum chr7 1 CH_sgi_1308 2 2 0.000487151
Saccharum spontaneum Chr2B 1 CH_ssp_894 2 2 0.000238589
Allium sativum chr8 2 CH_asa_133 4 8 0.00000000604699
Amborella trichopoda AmTr_v1.0_scaffold00038 2 CH_atr_249 2 2 0.000238322
Cenchrus purpureus GWHAORA00000002 2 CH_cpu_872 2 2 0.000865587
Cenchrus purpureus GWHAORA00000010 2 CH_cpu_873 2 2 0.000865587
Digitaria exilis Dexi_CM05836_chr02A 2 CH_dex_692 2 2 0.000701825
Hordeum vulgare chr6H 2 CH_hvu_447 2 3 0.00073047
Oryza alta GWHAZTO00000015 2 CH_oal_176 3 4 0.000000136437
Sequoiadendron giganteum chr7 2 CH_sgi_1308 2 2 0.000487151
Saccharum spontaneum Chr2B 2 CH_ssp_894 2 2 0.000238589

Functional Clusters Experiments

Exp id Data type Data filter Min genes cluster Max genes cluster Max cluster size E-value Tandems removal
1 MapMan No filter applied. 2 30 80 0.001
2 MapMan No filter applied. 2 30 80 0.001
3 GO All GO data. 2 30 80 0.001
4 GO All GO data. 2 30 80 0.001
5 InterPro No filter applied. 2 30 80 0.001
6 InterPro No filter applied. 2 30 80 0.001