Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Zjn_sc00002.1.g14410.1.am.mkhc Zoysia japonica ssp. nagirizaki HOM05M002045 ORTHO05M004829 1.0e-67 259.2 133 100.0
PH02Gene03619 Phyllostachys edulis HOM05M002045 ORTHO05M004829 3.7e-38 161.0 103 83.5
EJB05_08016 Eragrostis curvula HOM05M002045 ORTHO05M004829 6.3e-38 160.2 93 90.3
OB03G13740 Oryza brachyantha HOM05M002045 ORTHO05M004829 8.3e-38 159.8 179 53.6
GWHGAORA054443 Cenchrus purpureus HOM05M002045 ORTHO05M004829 2.4e-37 158.3 211 47.9
GWHGAZTO000490 Oryza alta HOM05M002045 ORTHO05M004829 7.0e-37 156.8 113 79.6
Bradi1g75250 Brachypodium distachyon HOM05M002045 ORTHO05M004829 1.2e-36 156.0 100 84.0
Ot_Chr4_g00072 Oropetium thomaeum HOM05M002045 ORTHO05M004829 1.2e-36 156.0 93 89.2
GWHGAZTO022121 Oryza alta HOM05M002045 ORTHO05M004829 2.7e-36 154.8 100 84.0
OsKitaake03g038200 Oryza sativa Kitaake HOM05M002045 ORTHO05M004829 7.7e-36 153.3 93 87.1
TraesCS4B03G0810400 Triticum aestivum HOM05M002045 ORTHO05M004829 2.3e-35 151.8 93 87.1
TraesCS4D03G0726800 Triticum aestivum HOM05M002045 ORTHO05M004829 2.3e-35 151.8 93 87.1
Horvu_MOREX_4H01G465600 Hordeum vulgare HOM05M002045 ORTHO05M004829 2.9e-35 151.4 93 87.1
TRITD4Av1G227130 Triticum turgidum HOM05M002045 ORTHO05M004829 2.9e-35 151.4 93 87.1
GWHGASIY037634 Secale cereale HOM05M002045 ORTHO05M004829 6.5e-35 150.2 93 86.0
Misin01G482300 Miscanthus sinensis HOM05M002045 ORTHO05M004829 1.1e-34 149.4 93 82.8
Sevir.9G545400 Setaria viridis HOM05M002045 ORTHO05M004829 1.1e-34 149.4 211 46.9
TraesCS4A03G1018100 Triticum aestivum HOM05M002045 ORTHO05M004829 1.1e-34 149.4 92 87.0
Zm00001eb003810 Zea mays B73 HOM05M002045 ORTHO05M004829 1.1e-34 149.4 93 83.9
Zm00007a00002061 Zea mays B104 HOM05M002045 ORTHO05M004829 1.1e-34 149.4 93 83.9
Misin02G475600 Miscanthus sinensis HOM05M002045 ORTHO05M004829 1.5e-34 149.1 93 84.9
Dexi9A01G0047110 Digitaria exilis HOM05M002045 ORTHO05M004829 1.9e-34 148.7 93 83.9
Pahal.9G605400 Panicum hallii HOM05M002045 ORTHO05M004829 1.9e-34 148.7 103 79.6
Sobic.001G504200 Sorghum bicolor HOM05M002045 ORTHO05M004829 2.8e-33 144.8 93 82.8
p5.00_sc00085_p0008 Elaeis guineensis HOM05M002045 ORTHO05M004829 1.4e-29 132.5 100 68.0
DDU407G0020 Dioscorea dumetorum HOM05M002045 ORTHO05M004829 1.0e-27 126.3 117 59.0
DDU805G0006 Dioscorea dumetorum HOM05M002045 ORTHO05M004829 1.0e-27 126.3 117 59.0
Asa7G05418 Allium sativum HOM05M002045 ORTHO05M004829 1.3e-27 125.9 107 61.7
Ma04_g20450 Musa acuminata HOM05M002045 ORTHO05M004829 1.3e-27 125.9 100 65.0
Spipo16G0041500 Spirodela polyrhiza HOM05M002045 ORTHO05M004829 1.9e-26 122.1 113 61.1
CALSI_Maker00008186 Calamus simplicifolius HOM05M002045 ORTHO05M004829 2.5e-26 121.7 100 67.0
Potri.006G120800 Populus trichocarpa HOM05M002045 ORTHO05M004829 3.3e-26 121.3 101 63.4
Dexi9B01G0046520 Digitaria exilis HOM05M002045 ORTHO05M004829 5.6e-26 120.6 72 84.7
Glyma.19G186900 Glycine max HOM05M002045 ORTHO05M004829 2.1e-25 118.6 101 62.4
ATR0043G024 Amborella trichopoda HOM05M002045 ORTHO05M004829 2.8e-25 118.2 93 62.4
AT2G36810 Arabidopsis thaliana HOM05M002045 ORTHO05M004829 4.7e-25 117.5 100 63.0
Solyc09g008490.4 Solanum lycopersicum HOM05M002045 ORTHO05M004829 1.0e-24 116.3 101 58.4
HPP92_022597 Vanilla planifolia HOM05M002045 ORTHO05M004829 3.2e-21 104.8 100 60.0
Seita.9G540900 Setaria italica HOM05M002045 ORTHO05M004829 4.1e-21 104.4 178 40.4
Zosma05g27550 Zostera marina HOM05M002045 ORTHO05M004829 1.2e-20 102.8 99 55.6
SEGI_24462 Sequoiadendron giganteum HOM05M002045 ORTHO05M004829 5.2e-16 87.4 102 47.1
TRITD4Bv1G179100 Triticum turgidum HOM05M002045 ORTHO05M004829 3.6e-09 64.7 40 87.5
Mapoly0008s0039 Marchantia polymorpha HOM05M002045 ORTHO05M004829 4.0e-08 61.2 120 35.0


User provided reference genes

Program Settings