Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_scaffold_665G6 Lolium perenne HOM05M002153 ORTHO05M001437 0.0e+00 1504.2 780 100.0
V3.Lp_chr6_0G11414 Lolium perenne HOM05M002153 ORTHO05M001437 9.1e-286 986.1 948 58.0
V3.Lp_chr5_0G14030 Lolium perenne HOM05M002153 ORTHO05M001437 6.2e-210 734.2 553 69.4
V3.Lp_chr5_0G13724 Lolium perenne HOM05M002153 ORTHO05M001437 2.0e-171 606.3 986 40.2
V3.Lp_chr2_0G9496 Lolium perenne HOM05M002153 ORTHO05M001437 3.8e-167 592.0 880 41.7
V3.Lp_chr4_0G10514 Lolium perenne HOM05M002153 ORTHO05M001437 1.5e-158 563.5 913 41.2
V3.Lp_chr4_0G17192 Lolium perenne HOM05M002153 ORTHO05M001437 1.2e-157 560.5 988 38.7
V3.Lp_chr6_0G7726 Lolium perenne HOM05M002153 ORTHO05M001437 8.8e-148 527.7 660 45.5
V3.Lp_chr3_0G15336 Lolium perenne HOM05M002153 ORTHO05M001437 5.4e-145 518.5 946 35.9
V3.Lp_chr6_0G4180 Lolium perenne HOM05M002153 ORTHO05M001437 1.3e-143 513.8 966 36.1
V3.Lp_chr6_0G16060 Lolium perenne HOM05M002153 ORTHO05M001437 4.7e-141 505.4 888 37.7
V3.Lp_chr5_0G10032 Lolium perenne HOM05M002153 ORTHO05M001437 2.6e-139 499.6 968 36.0
V3.Lp_chr3_0G5930 Lolium perenne HOM05M002153 ORTHO05M001437 7.5e-139 498.0 590 48.3
V3.Lp_chr4_0G10778 Lolium perenne HOM05M002153 ORTHO05M001437 3.0e-135 486.1 608 45.4
V3.Lp_chr2_0G20212 Lolium perenne HOM05M002153 ORTHO05M001437 7.3e-134 481.5 935 34.7
V3.Lp_chr3_0G16556 Lolium perenne HOM05M002153 ORTHO05M001437 8.3e-122 441.4 306 68.3
V3.Lp_chr3_0G5200 Lolium perenne HOM05M002153 ORTHO05M001437 4.9e-106 389.0 820 35.0
V3.Lp_chr3_0G16624 Lolium perenne HOM05M002153 ORTHO05M001437 4.6e-104 382.5 579 40.6
V3.Lp_chr4_0G1188 Lolium perenne HOM05M002153 ORTHO05M001437 1.7e-103 380.6 588 40.1
V3.Lp_chr6_0G9778 Lolium perenne HOM05M002153 ORTHO05M001437 3.3e-102 376.3 877 33.4
V3.Lp_chr5_0G12298 Lolium perenne HOM05M002153 ORTHO05M001437 1.4e-97 360.9 854 33.0
V3.Lp_chr1_0G8276 Lolium perenne HOM05M002153 ORTHO05M001437 5.4e-97 359.0 952 29.7
V3.Lp_chr5_0G16530 Lolium perenne HOM05M002153 ORTHO05M001437 1.6e-96 357.5 476 46.6
V3.Lp_chr6_0G8192 Lolium perenne HOM05M002153 ORTHO05M001437 1.8e-95 354.0 688 33.7
V3.Lp_chr4_0G2318 Lolium perenne HOM05M002153 ORTHO05M001437 1.9e-94 350.5 646 34.8
V3.Lp_chr4_0G14684 Lolium perenne HOM05M002153 ORTHO05M001437 2.1e-93 347.1 624 35.1
V3.Lp_chr1_0G10392 Lolium perenne HOM05M002153 ORTHO05M001437 4.8e-93 345.9 933 29.2
V3.Lp_chr2_0G17102 Lolium perenne HOM05M002153 ORTHO05M001437 2.9e-90 336.7 940 29.8
V3.Lp_chr1_0G19832 Lolium perenne HOM05M002153 ORTHO05M001437 3.0e-87 326.6 419 43.4
V3.Lp_chr2_0G8686 Lolium perenne HOM05M002153 ORTHO05M001437 5.3e-84 315.8 652 34.4
V3.Lp_chr2_0G21542 Lolium perenne HOM05M002153 ORTHO05M001437 9.0e-84 315.1 839 31.3
V3.Lp_chr5_0G6020 Lolium perenne HOM05M000004 ORTHO05M001437 1.6e-80 304.3 286 53.1
V3.Lp_chr5_0G15152 Lolium perenne HOM05M002153 ORTHO05M001437 8.7e-79 298.5 561 34.9
V3.Lp_chr1_0G10672 Lolium perenne HOM05M002153 ORTHO05M001437 9.7e-78 295.0 636 36.2
V3.Lp_chr6_0G9388 Lolium perenne HOM05M002153 ORTHO05M001437 3.1e-76 290.0 590 33.4
V3.Lp_scaffold_3110G2 Lolium perenne HOM05M002153 ORTHO05M001437 3.4e-75 286.6 790 31.0
V3.Lp_chr4_0G9888 Lolium perenne HOM05M002153 ORTHO05M001437 1.9e-70 270.8 892 29.0
V3.Lp_chr3_0G3708 Lolium perenne HOM05M002153 ORTHO05M001437 5.0e-66 256.1 650 30.6
V3.Lp_chr5_0G6438 Lolium perenne HOM05M002153 ORTHO05M001437 6.7e-63 245.7 293 45.4
V3.Lp_chr3_0G13524 Lolium perenne HOM05M002153 ORTHO05M001437 6.3e-61 239.2 445 37.5
V3.Lp_chr4_0G17218 Lolium perenne HOM05M002153 ORTHO05M001437 8.5e-58 228.8 337 41.8
Horvu_MOREX_4H01G176900 Hordeum vulgare HOM05M005127 ORTHO05M001437 3.1e-52 210.3 608 29.8
Horvu_MOREX_5H01G195100 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.1e-48 197.6 595 31.4
V3.Lp_chr3_0G11654 Lolium perenne HOM05M002153 ORTHO05M001437 1.8e-44 184.5 223 46.2
V3.Lp_chr3_0G14524 Lolium perenne HOM05M002153 ORTHO05M001437 1.9e-41 174.5 144 54.9
Horvu_MOREX_4H01G083900 Hordeum vulgare HOM05M005127 ORTHO05M001437 3.6e-40 170.2 580 29.8
V3.Lp_chr4_0G25204 Lolium perenne HOM05M003368 ORTHO05M001437 1.4e-39 168.3 120 64.2
Horvu_MOREX_1H01G254200 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.2e-39 166.4 543 30.4
Horvu_MOREX_6H01G471600 Hordeum vulgare HOM05M005127 ORTHO05M001437 8.8e-39 165.6 404 31.4
Horvu_MOREX_2H01G356900 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.3e-37 161.8 578 28.5
Horvu_MOREX_4H01G253500 Hordeum vulgare HOM05M005127 ORTHO05M001437 4.1e-36 156.8 270 38.5
Horvu_MOREX_7H01G470900 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.7e-35 154.1 236 39.0
V3.Lp_chr3_0G3848 Lolium perenne HOM05M002153 ORTHO05M001437 6.6e-34 149.4 342 30.1
Horvu_MOREX_1H01G206700 Hordeum vulgare HOM05M005127 ORTHO05M001437 3.3e-33 147.1 529 27.4
Horvu_MOREX_2H01G347100 Hordeum vulgare HOM05M005127 ORTHO05M001437 3.3e-33 147.1 394 31.0
EJB05_20344 Eragrostis curvula HOM05M002153 ORTHO05M001437 1.8e-31 141.4 406 27.3
EJB05_27300 Eragrostis curvula HOM05M002153 ORTHO05M001437 4.9e-29 133.3 252 32.1
EJB05_41913 Eragrostis curvula HOM05M002153 ORTHO05M001437 1.1e-28 132.1 326 29.4
EJB05_13918 Eragrostis curvula HOM05M002153 ORTHO05M001437 4.1e-28 130.2 252 31.3
EJB05_44364 Eragrostis curvula HOM05M002153 ORTHO05M001437 3.5e-27 127.1 291 29.9
EJB05_28466 Eragrostis curvula HOM05M002153 ORTHO05M001437 5.9e-27 126.3 418 28.2
EJB05_51223 Eragrostis curvula HOM05M002153 ORTHO05M001437 7.8e-27 125.9 363 26.4
EJB05_55207 Eragrostis curvula HOM05M002153 ORTHO05M001437 2.3e-26 124.4 442 27.4
Bradi5g03715 Brachypodium distachyon HOM05M002153 ORTHO05M001437 5.0e-26 123.2 438 27.4
Pahal.3G162150 Panicum hallii HOM05M002153 ORTHO05M001437 5.0e-26 123.2 405 27.7
EJB05_33589 Eragrostis curvula HOM05M002153 ORTHO05M001437 6.6e-26 122.9 431 30.9
V3.Lp_chr4_0G1208 Lolium perenne HOM05M002153 ORTHO05M001437 6.6e-26 122.9 103 54.4
EJB05_05880 Eragrostis curvula HOM05M002153 ORTHO05M000474 8.6e-26 122.5 327 27.8
Horvu_MOREX_6H01G294600 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.6e-25 119.8 586 26.1
Horvu_MOREX_3H01G307000 Hordeum vulgare HOM05M005127 ORTHO05M001437 7.3e-25 119.4 675 23.9
EJB05_16228 Eragrostis curvula HOM05M002153 ORTHO05M001437 1.6e-24 118.2 317 28.1
EJB05_34321 Eragrostis curvula HOM05M002153 ORTHO05M001437 4.7e-24 116.7 322 27.0
EJB05_52841 Eragrostis curvula HOM05M002153 ORTHO05M001437 4.7e-24 116.7 322 27.0
EJB05_40361 Eragrostis curvula HOM05M002153 ORTHO05M001437 5.2e-23 113.2 333 26.7
EJB05_15707 Eragrostis curvula HOM05M002153 ORTHO05M001437 1.2e-22 112.1 324 26.2
EJB05_47304 Eragrostis curvula HOM05M002153 ORTHO05M001437 2.0e-22 111.3 333 26.4
Misin15G130900 Miscanthus sinensis HOM05M002153 ORTHO05M001437 2.0e-22 111.3 404 25.0
Horvu_MOREX_Un01G028800 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.8e-22 109.8 558 26.7
EJB05_47351 Eragrostis curvula HOM05M002153 ORTHO05M001437 7.5e-22 109.4 333 26.1
Misin08G134200 Miscanthus sinensis HOM05M002153 ORTHO05M001437 1.1e-20 105.5 171 32.2
EJB05_49350 Eragrostis curvula HOM05M000592 ORTHO05M001437 5.4e-20 103.2 702 21.7
Os04g0330400 Oryza sativa ssp. japonica HOM05M002153 ORTHO05M001437 1.2e-19 102.1 241 31.1
OsKitaake02g150350 Oryza sativa Kitaake HOM05M002153 ORTHO05M001437 4.6e-19 100.1 245 27.8
EJB05_35141 Eragrostis curvula HOM05M002153 ORTHO05M001437 2.3e-18 97.8 239 28.5
Horvu_MOREX_7H01G610400 Hordeum vulgare HOM05M005127 ORTHO05M001437 6.6e-18 96.3 100 46.0
GWHGAZTO087455 Oryza alta HOM05M002153 ORTHO05M001437 8.6e-18 95.9 222 28.8
V3.Lp_chr4_0G15466 Lolium perenne HOM05M002153 ORTHO05M013380 7.3e-17 92.8 265 29.8
GWHGAZTO043296 Oryza alta HOM05M002153 ORTHO05M001437 9.5e-17 92.4 97 43.3
Horvu_MOREX_6H01G319300 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.1e-16 91.3 84 47.6
V3.Lp_chr1_0G10676 Lolium perenne HOM05M001585 ORTHO05M001491 3.6e-16 90.5 317 26.8
OsKitaake11g108600 Oryza sativa Kitaake HOM05M002153 ORTHO05M001437 1.4e-15 88.6 289 28.4
V3.Lp_chr6_0G2302 Lolium perenne HOM05M002153 ORTHO05M001437 3.1e-15 87.4 161 35.4
EJB05_57902 Eragrostis curvula HOM05M002153 ORTHO05M001437 4.0e-15 87.0 187 28.9
OsKitaake08g108900 Oryza sativa Kitaake HOM05M002153 ORTHO05M001437 6.8e-15 86.3 605 21.5
EJB05_37343 Eragrostis curvula HOM05M002153 ORTHO05M012906 8.9e-15 85.9 334 26.3
Horvu_MOREX_7H01G361500 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.2e-14 85.5 100 42.0
V3.Lp_chr2_0G9254 Lolium perenne HOM05M015904 ORTHO05M013380 1.2e-14 85.5 255 32.2
V3.Lp_chr2_0G21536 Lolium perenne HOM05M002153 ORTHO05M001437 1.5e-14 85.1 176 31.2
V3.Lp_chr4_0G18062 Lolium perenne HOM05M000004 ORTHO05M013380 1.5e-14 85.1 248 29.0
Horvu_MOREX_3H01G111500 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.6e-14 84.3 139 36.0
V3.Lp_chr4_0G26644 Lolium perenne HOM05M015904 ORTHO05M013380 2.6e-14 84.3 249 32.5
Sobic.007G042150 Sorghum bicolor HOM05M001585 ORTHO05M001491 4.4e-14 83.6 532 25.6
Horvu_MOREX_3H01G175900 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.7e-13 81.6 102 39.2
Horvu_MOREX_5H01G369600 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.7e-13 81.6 91 44.0
Horvu_MOREX_7H01G372200 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.2e-13 81.3 79 45.6
V3.Lp_chr2_0G1138 Lolium perenne HOM05M000004 ORTHO05M000008 2.9e-13 80.9 519 23.1
GWHGAZTO066398 Oryza alta HOM05M021172 ORTHO05M014888 2.9e-13 80.9 172 32.0
EJB05_55348 Eragrostis curvula HOM05M002153 ORTHO05M001437 6.4e-13 79.7 121 33.9
Horvu_MOREX_7H01G406600 Hordeum vulgare HOM05M005127 ORTHO05M001437 6.4e-13 79.7 96 40.6
Horvu_MOREX_3H01G310600 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.1e-12 79.0 451 23.9
Horvu_MOREX_3H01G370600 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.4e-12 78.6 75 46.7
Horvu_MOREX_3H01G489200 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.4e-12 78.6 90 44.4
OsKitaake02g157500 Oryza sativa Kitaake HOM05M002153 ORTHO05M019950 1.4e-12 78.6 502 23.7
GWHGAZTO011198 Oryza alta HOM05M002153 ORTHO05M001437 1.9e-12 78.2 93 41.9
TraesCS4B03G0769300 Triticum aestivum HOM05M001585 ORTHO05M001491 1.9e-12 78.2 295 26.8
Horvu_MOREX_6H01G475400 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.4e-12 76.6 83 45.8
Horvu_MOREX_6H01G516200 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.4e-12 76.6 67 50.7
Horvu_MOREX_7H01G679400 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.4e-12 76.6 87 41.4
Bradi1g38061 Brachypodium distachyon HOM05M001585 ORTHO05M001491 1.2e-11 75.5 462 24.0
OsKitaake02g178300 Oryza sativa Kitaake HOM05M002153 ORTHO05M001437 1.2e-11 75.5 94 38.3
Bradi4g07735 Brachypodium distachyon HOM05M002153 ORTHO05M013380 2.7e-11 74.3 238 27.7
EJB05_36674 Eragrostis curvula HOM05M002153 ORTHO05M012906 2.7e-11 74.3 377 27.3
Horvu_MOREX_6H01G471500 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.7e-11 74.3 67 49.3
AET2Gv20533900 Aegilops tauschii HOM05M001585 ORTHO05M001491 3.5e-11 73.9 255 27.8
Bradi1g39570 Brachypodium distachyon HOM05M001585 ORTHO05M001491 4.6e-11 73.6 238 25.2
GWHGAZTO091899 Oryza alta HOM05M002153 ORTHO05M019950 4.6e-11 73.6 192 28.1
Horvu_MOREX_2H01G333900 Hordeum vulgare HOM05M005127 ORTHO05M001437 7.8e-11 72.8 67 47.8
Sobic.004G324950 Sorghum bicolor HOM05M001585 ORTHO05M001491 7.8e-11 72.8 233 27.0
Sobic.005G207900 Sorghum bicolor HOM05M001585 ORTHO05M001491 7.8e-11 72.8 237 27.8
Horvu_MOREX_7H01G516100 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.0e-10 72.4 67 47.8
Horvu_MOREX_2H01G470800 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.3e-10 72.0 62 51.6
Horvu_MOREX_7H01G077100 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.3e-10 72.0 62 51.6
Horvu_MOREX_3H01G458900 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.1e-10 70.1 91 41.8
AET3Gv20257500 Aegilops tauschii HOM05M005127 ORTHO05M001437 8.6e-10 69.3 73 46.6
Horvu_MOREX_2H01G296500 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.9e-09 68.2 303 27.7
Horvu_MOREX_3H01G454600 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.9e-09 68.2 70 42.9
Horvu_MOREX_2H01G296400 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.5e-09 67.8 87 42.5
Horvu_MOREX_1H01G144900 Hordeum vulgare HOM05M005127 ORTHO05M001437 4.3e-09 67.0 72 45.8
Horvu_MOREX_6H01G265600 Hordeum vulgare HOM05M005127 ORTHO05M001437 4.3e-09 67.0 76 46.1
Sobic.001G209701 Sorghum bicolor HOM05M001585 ORTHO05M001491 4.3e-09 67.0 178 28.7
Horvu_MOREX_5H01G435500 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.6e-09 66.6 76 44.7
Zjn_sc00001.1.g12130.1.am.mk Zoysia japonica ssp. nagirizaki HOM05M002153 ORTHO05M001437 5.6e-09 66.6 201 23.9
Misin13G120700 Miscanthus sinensis HOM05M001585 ORTHO05M001491 9.5e-09 65.9 161 28.6
EJB05_31773 Eragrostis curvula HOM05M001585 ORTHO05M001491 1.2e-08 65.5 249 26.5
AET4Gv20422900 Aegilops tauschii HOM05M005127 ORTHO05M001437 2.8e-08 64.3 71 46.5
Horvu_MOREX_4H01G183100 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.8e-08 64.3 52 53.8
Sobic.003G160400 Sorghum bicolor HOM05M001585 ORTHO05M001491 2.8e-08 64.3 241 25.7
EJB05_36948 Eragrostis curvula HOM05M001585 ORTHO05M001491 3.6e-08 63.9 249 25.7
Horvu_MOREX_6H01G108600 Hordeum vulgare HOM05M005127 ORTHO05M001437 4.7e-08 63.5 72 43.1
Horvu_MOREX_7H01G209100 Hordeum vulgare HOM05M005127 ORTHO05M001437 4.7e-08 63.5 71 45.1
Horvu_MOREX_2H01G272300 Hordeum vulgare HOM05M005127 ORTHO05M001437 6.2e-08 63.2 72 44.4
Horvu_MOREX_2H01G439100 Hordeum vulgare HOM05M005127 ORTHO05M001437 6.2e-08 63.2 71 45.1
Sobic.005G144800 Sorghum bicolor HOM05M001585 ORTHO05M001491 6.2e-08 63.2 261 25.3
Sspon.07G0014990-1A Saccharum spontaneum HOM05M001585 ORTHO05M001491 8.1e-08 62.8 270 25.2
V3.Lp_chr3_0G19318 Lolium perenne HOM05M000004 ORTHO05M000274 1.1e-07 62.4 79 50.6
AET3Gv20706200 Aegilops tauschii HOM05M005127 ORTHO05M001437 1.4e-07 62.0 70 42.9
Horvu_MOREX_4H01G284900 Hordeum vulgare HOM05M005127 ORTHO05M001437 1.4e-07 62.0 72 43.1
Sevir.2G181600 Setaria viridis HOM05M010040 ORTHO05M012561 1.8e-07 61.6 403 26.8
Dexi9B01G0026320 Digitaria exilis HOM05M002153 ORTHO05M001437 2.3e-07 61.2 94 37.2
AET7Gv20720600 Aegilops tauschii HOM05M005127 ORTHO05M001437 3.1e-07 60.8 52 53.8
AET1Gv20293900 Aegilops tauschii HOM05M005127 ORTHO05M001437 4.0e-07 60.5 52 53.8
Horvu_MOREX_1H01G289900 Hordeum vulgare HOM05M005127 ORTHO05M001437 4.0e-07 60.5 73 41.1
Horvu_MOREX_7H01G342300 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.2e-07 60.1 41 61.0
Sobic.007G145300 Sorghum bicolor HOM05M001585 ORTHO05M001491 5.2e-07 60.1 239 24.7
Horvu_MOREX_5H01G099500 Hordeum vulgare HOM05M005127 ORTHO05M001437 6.8e-07 59.7 72 41.7
EJB05_50163 Eragrostis curvula HOM05M002153 ORTHO05M012906 8.9e-07 59.3 241 25.3
Horvu_MOREX_3H01G290800 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.0e-06 58.2 41 58.5
AET7Gv20718300 Aegilops tauschii HOM05M005127 ORTHO05M001437 2.6e-06 57.8 52 51.9
Horvu_MOREX_1H01G406400 Hordeum vulgare HOM05M005127 ORTHO05M001437 2.6e-06 57.8 72 43.1
EJB05_02783 Eragrostis curvula HOM05M002153 ORTHO05M001437 5.8e-06 56.6 140 30.0
Horvu_MOREX_2H01G352000 Hordeum vulgare HOM05M005127 ORTHO05M001437 5.8e-06 56.6 41 56.1
AET2Gv20568200 Aegilops tauschii HOM05M005127 ORTHO05M001437 7.5e-06 56.2 72 41.7
Bradi2g41848 Brachypodium distachyon HOM05M001585 ORTHO05M001491 9.9e-06 55.8 154 29.2
Horvu_MOREX_6H01G437600 Hordeum vulgare HOM05M005127 ORTHO05M001437 9.9e-06 55.8 41 61.0


User provided reference genes

Program Settings