Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_chr1_0G2678 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr2_0G10698 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr2_0G16558 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr2_0G3180 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr3_0G17802 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr3_0G20402 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr3_0G24060 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr3_0G2674 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr3_0G6012 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr4_0G16282 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr4_0G19656 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr5_0G5300 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr6_0G7088 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_scaffold_3443G2 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_scaffold_438G4 Lolium perenne HOM05M000325 ORTHO05M009816 1.2e-59 232.3 118 100.0
V3.Lp_chr1_0G2414 Lolium perenne HOM05M000325 ORTHO05M009816 2.7e-56 221.1 118 95.8
V3.Lp_scaffold_1424G2 Lolium perenne HOM05M000325 ORTHO05M009816 2.7e-56 221.1 118 95.8
V3.Lp_chr1_0G11922 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr2_0G10810 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr3_0G15316 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr3_0G2970 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr4_0G13516 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr4_0G5130 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr4_0G5322 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr4_0G5690 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr5_0G12854 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr5_0G8818 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr6_0G1714 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr6_0G18026 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr6_0G2748 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_scaffold_486G2 Lolium perenne HOM05M000325 ORTHO05M009816 1.9e-49 198.4 102 100.0
V3.Lp_chr1_0G9942 Lolium perenne HOM05M000325 ORTHO05M009816 9.2e-49 196.1 102 99.0
V3.Lp_chr4_0G25550 Lolium perenne HOM05M000325 ORTHO05M000263 5.1e-47 190.3 105 94.3
V3.Lp_chr2_0G6140 Lolium perenne HOM05M000325 ORTHO05M000263 1.1e-46 189.1 109 89.0
V3.Lp_chr5_0G18812 Lolium perenne HOM05M000325 ORTHO05M000263 1.1e-46 189.1 109 89.0
V3.Lp_chr6_0G5738 Lolium perenne HOM05M000325 ORTHO05M000263 1.1e-46 189.1 109 89.0
V3.Lp_chr3_0G25616 Lolium perenne HOM05M000325 ORTHO05M009816 2.3e-39 164.9 103 88.3
V3.Lp_chr4_0G17578 Lolium perenne HOM05M000325 ORTHO05M009816 1.1e-38 162.5 111 81.1
V3.Lp_chr1_0G9470 Lolium perenne HOM05M000325 ORTHO05M000263 1.2e-27 125.9 66 100.0
V3.Lp_chr3_0G15108 Lolium perenne HOM05M000325 ORTHO05M000263 5.8e-27 123.6 65 100.0
V3.Lp_chr6_0G12848 Lolium perenne HOM05M000325 ORTHO05M000263 5.8e-27 123.6 65 100.0
V3.Lp_chr6_0G16238 Lolium perenne HOM05M000325 ORTHO05M000263 5.8e-27 123.6 65 100.0
V3.Lp_chr1_0G15798 Lolium perenne HOM05M000325 ORTHO05M000263 4.9e-26 120.6 77 80.5
V3.Lp_chr6_0G17492 Lolium perenne HOM05M000325 ORTHO05M000263 6.4e-26 120.2 64 96.9
V3.Lp_chr2_0G16922 Lolium perenne HOM05M000325 ORTHO05M000263 8.4e-26 119.8 74 83.8
V3.Lp_chr1_0G17090 Lolium perenne HOM05M000325 ORTHO05M000263 2.1e-24 115.2 70 91.4
V3.Lp_chr3_0G8986 Lolium perenne HOM05M000325 ORTHO05M000263 2.7e-24 114.8 76 81.6
V3.Lp_chr4_0G16250 Lolium perenne HOM05M000325 ORTHO05M009816 4.6e-24 114.0 83 79.5
V3.Lp_chr1_0G17356 Lolium perenne HOM05M000325 ORTHO05M009816 7.9e-24 113.2 90 73.3
V3.Lp_chr5_0G14460 Lolium perenne HOM05M000325 ORTHO05M009816 1.0e-23 112.8 66 84.8
V3.Lp_chr2_0G23452 Lolium perenne HOM05M000325 ORTHO05M009816 1.3e-23 112.5 83 78.3
V3.Lp_chr5_0G6030 Lolium perenne HOM05M000325 ORTHO05M000263 1.3e-23 112.5 65 92.3
V3.Lp_chr5_0G14786 Lolium perenne HOM05M000325 ORTHO05M009816 3.0e-23 111.3 62 93.5
V3.Lp_chr1_0G6954 Lolium perenne HOM05M000325 ORTHO05M000263 3.9e-23 110.9 70 84.3
V3.Lp_chr2_0G8528 Lolium perenne HOM05M000325 ORTHO05M009816 3.9e-23 110.9 83 77.1
V3.Lp_chr4_0G14668 Lolium perenne HOM05M000325 ORTHO05M009816 5.1e-23 110.5 69 88.4
V3.Lp_chr2_0G6512 Lolium perenne HOM05M000325 ORTHO05M009816 6.7e-23 110.2 83 77.1
V3.Lp_scaffold_8688G2 Lolium perenne HOM05M000325 ORTHO05M009816 6.7e-23 110.2 83 77.1
V3.Lp_chr6_0G11696 Lolium perenne HOM05M000325 ORTHO05M009816 8.7e-23 109.8 90 71.1
V3.Lp_scaffold_4463G2 Lolium perenne HOM05M000325 ORTHO05M000263 1.9e-22 108.6 67 86.6
V3.Lp_chr6_0G12448 Lolium perenne HOM05M000325 ORTHO05M009816 3.3e-22 107.8 62 91.9
V3.Lp_chr2_0G21010 Lolium perenne HOM05M000325 ORTHO05M000263 4.3e-22 107.5 87 73.6
V3.Lp_chr6_0G16038 Lolium perenne HOM05M000325 ORTHO05M000263 5.6e-22 107.1 69 79.7
V3.Lp_chr6_0G6468 Lolium perenne HOM05M000325 ORTHO05M009816 5.6e-22 107.1 65 84.6
V3.Lp_chr4_0G14670 Lolium perenne HOM05M000325 ORTHO05M000263 9.6e-22 106.3 70 85.7
V3.Lp_chr1_0G10242 Lolium perenne HOM05M000325 ORTHO05M000263 4.8e-21 104.0 66 81.8
V3.Lp_chr4_0G28796 Lolium perenne HOM05M000325 ORTHO05M000263 4.8e-21 104.0 66 81.8
V3.Lp_chr4_0G29006 Lolium perenne HOM05M000325 ORTHO05M000263 4.8e-21 104.0 66 81.8
V3.Lp_chr5_0G9528 Lolium perenne HOM05M000325 ORTHO05M000263 4.8e-21 104.0 66 81.8
V3.Lp_chr6_0G8256 Lolium perenne HOM05M000325 ORTHO05M000263 4.8e-21 104.0 66 81.8
V3.Lp_chr4_0G16114 Lolium perenne HOM05M000325 ORTHO05M000263 6.2e-21 103.6 79 77.2
V3.Lp_chr6_0G10872 Lolium perenne HOM05M000325 ORTHO05M000263 8.1e-21 103.2 66 80.3
V3.Lp_chr2_0G12036 Lolium perenne HOM05M000325 ORTHO05M009816 1.1e-20 102.8 70 82.9
V3.Lp_chr3_0G19582 Lolium perenne HOM05M000325 ORTHO05M000263 1.1e-20 102.8 90 67.8
V3.Lp_chr1_0G17084 Lolium perenne HOM05M000325 ORTHO05M000263 1.4e-20 102.4 72 80.6
V3.Lp_chr2_0G23800 Lolium perenne HOM05M000325 ORTHO05M009816 1.4e-20 102.4 84 75.0
V3.Lp_chr4_0G7250 Lolium perenne HOM05M000325 ORTHO05M000263 2.4e-20 101.7 72 75.0
V3.Lp_chr5_0G9398 Lolium perenne HOM05M000325 ORTHO05M009816 2.4e-20 101.7 72 75.0
V3.Lp_chr6_0G15460 Lolium perenne HOM05M000325 ORTHO05M000263 2.4e-20 101.7 72 75.0
V3.Lp_chr1_0G4962 Lolium perenne HOM05M000325 ORTHO05M010738 3.1e-20 101.3 68 83.8
V3.Lp_chr2_0G634 Lolium perenne HOM05M000002 ORTHO05M000002 4.0e-20 100.9 55 96.4
V3.Lp_chr3_0G12960 Lolium perenne HOM05M000325 ORTHO05M009816 5.3e-20 100.5 71 74.6
V3.Lp_chr1_0G7698 Lolium perenne HOM05M000325 ORTHO05M000263 6.9e-20 100.1 72 73.6
V3.Lp_chr3_0G9610 Lolium perenne HOM05M000325 ORTHO05M000263 6.9e-20 100.1 72 73.6
V3.Lp_chr2_0G20130 Lolium perenne HOM05M000325 ORTHO05M000263 9.0e-20 99.8 90 65.6
V3.Lp_chr4_0G22888 Lolium perenne HOM05M000325 ORTHO05M000263 1.2e-19 99.4 90 65.6
V3.Lp_chr4_0G7770 Lolium perenne HOM05M000325 ORTHO05M000263 1.2e-19 99.4 58 89.7
V3.Lp_chr1_0G16112 Lolium perenne HOM05M000325 ORTHO05M009816 1.5e-19 99.0 77 75.3
V3.Lp_chr3_0G18846 Lolium perenne HOM05M000325 ORTHO05M000263 1.5e-19 99.0 55 94.5
V3.Lp_chr4_0G11238 Lolium perenne HOM05M000325 ORTHO05M000263 2.0e-19 98.6 56 92.9
V3.Lp_chr6_0G1902 Lolium perenne HOM05M000325 ORTHO05M009816 2.0e-19 98.6 83 74.7
V3.Lp_chr2_0G554 Lolium perenne HOM05M000325 ORTHO05M000263 3.4e-19 97.8 56 91.1
V3.Lp_chr4_0G23974 Lolium perenne HOM05M000325 ORTHO05M000263 4.5e-19 97.4 67 77.6
V3.Lp_chr6_0G2206 Lolium perenne HOM05M000325 ORTHO05M000263 1.3e-18 95.9 62 79.0
V3.Lp_chr3_0G13100 Lolium perenne HOM05M000325 ORTHO05M000263 2.2e-18 95.1 66 78.8
V3.Lp_chr2_0G16858 Lolium perenne HOM05M000325 ORTHO05M009816 2.9e-18 94.7 58 86.2
V3.Lp_chr1_0G5132 Lolium perenne HOM05M000325 ORTHO05M000263 3.8e-18 94.4 56 89.3
V3.Lp_chr4_0G17580 Lolium perenne HOM05M000325 ORTHO05M000263 3.8e-18 94.4 56 89.3
V3.Lp_chr3_0G11350 Lolium perenne HOM05M000325 ORTHO05M000263 6.5e-18 93.6 67 76.1
V3.Lp_chr2_0G4040 Lolium perenne HOM05M000325 ORTHO05M000263 1.4e-17 92.4 60 86.7
V3.Lp_chr5_0G5410 Lolium perenne HOM05M000325 ORTHO05M000263 2.5e-17 91.7 65 75.4
V3.Lp_chr2_0G11496 Lolium perenne HOM05M000325 ORTHO05M009816 9.3e-17 89.7 55 89.1
V3.Lp_chr1_0G4432 Lolium perenne HOM05M000325 ORTHO05M000263 1.6e-16 89.0 48 95.8
V3.Lp_chr3_0G19920 Lolium perenne HOM05M000325 ORTHO05M000263 2.1e-16 88.6 70 68.6
V3.Lp_chr2_0G15266 Lolium perenne HOM05M000325 ORTHO05M000263 6.0e-16 87.0 58 81.0
V3.Lp_chr3_0G24230 Lolium perenne HOM05M000325 ORTHO05M000263 7.9e-16 86.7 52 86.5
V3.Lp_chr6_0G8516 Lolium perenne HOM05M000325 ORTHO05M000263 6.7e-15 83.6 69 63.8
V3.Lp_chr4_0G22410 Lolium perenne HOM05M000325 ORTHO05M000263 1.9e-14 82.0 69 63.8
V3.Lp_chr5_0G18814 Lolium perenne HOM05M000325 ORTHO05M000263 2.1e-13 78.6 43 93.0
V3.Lp_chr6_0G2666 Lolium perenne HOM05M000325 ORTHO05M000263 1.5e-11 72.4 77 53.2
V3.Lp_chr5_0G15510 Lolium perenne HOM05M000325 ORTHO05M000263 3.2e-09 64.7 47 70.2
V3.Lp_chr3_0G15528 Lolium perenne HOM05M000325 ORTHO05M000263 4.2e-09 64.3 63 65.1
V3.Lp_chr3_0G10338 Lolium perenne HOM05M000325 ORTHO05M000263 1.1e-06 56.2 42 66.7
V3.Lp_chr4_0G17900 Lolium perenne HOM05M000325 ORTHO05M000263 2.5e-06 55.1 43 62.8


User provided reference genes

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