Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
V3.Lp_chr3_0G8484 Lolium perenne HOM05M000004 ORTHO05M002970 4.7e-308 1059.7 571 100.0
V3.Lp_chr2_0G14396 Lolium perenne HOM05M000004 ORTHO05M002970 9.7e-144 513.8 715 52.3
V3.Lp_chr1_0G9186 Lolium perenne HOM05M000004 ORTHO05M002970 1.8e-121 439.9 456 60.3
V3.Lp_chr2_0G5496 Lolium perenne HOM05M000004 ORTHO05M002970 3.5e-85 319.3 610 41.8
V3.Lp_chr3_0G15334 Lolium perenne HOM05M000004 ORTHO05M000008 2.5e-83 313.2 565 43.5
V3.Lp_chr1_0G16512 Lolium perenne HOM05M000004 ORTHO05M002970 4.0e-81 305.8 558 42.5
V3.Lp_chr7_0.1G7260 Lolium perenne HOM05M000004 ORTHO05M002970 1.2e-80 304.3 600 39.8
V3.Lp_chr6_0G10602 Lolium perenne HOM05M000220 ORTHO05M000605 2.6e-80 303.1 600 39.3
V3.Lp_chr5_0G8996 Lolium perenne HOM05M000004 ORTHO05M002970 5.8e-80 302.0 581 41.3
V3.Lp_chr3_0G17450 Lolium perenne HOM05M000004 ORTHO05M002970 7.6e-80 301.6 530 42.5
V3.Lp_chr3_0G6250 Lolium perenne HOM05M000004 ORTHO05M000008 1.2e-77 294.3 541 41.8
V3.Lp_chr4_0G21646 Lolium perenne HOM05M000004 ORTHO05M002970 2.1e-77 293.5 588 40.3
V3.Lp_chr2_0G24382 Lolium perenne HOM05M000004 ORTHO05M002970 2.7e-77 293.1 531 43.1
V3.Lp_chr4_0G7168 Lolium perenne HOM05M000004 ORTHO05M000008 1.7e-76 290.4 586 40.4
V3.Lp_chr5_0G9018 Lolium perenne HOM05M000004 ORTHO05M002970 2.5e-75 286.6 627 38.3
V3.Lp_chr6_0G20708 Lolium perenne HOM05M000004 ORTHO05M002970 2.5e-75 286.6 529 42.3
V3.Lp_chr4_0G27004 Lolium perenne HOM05M000004 ORTHO05M002970 8.1e-74 281.6 637 37.0
V3.Lp_chr4_0G7850 Lolium perenne HOM05M000004 ORTHO05M002970 1.4e-73 280.8 600 39.0
V3.Lp_chr4_0G304 Lolium perenne HOM05M000004 ORTHO05M002970 3.6e-66 256.1 603 37.3
V3.Lp_chr1_0G6004 Lolium perenne HOM05M000004 ORTHO05M000008 8.1e-66 255.0 531 37.3
V3.Lp_chr6_0G9756 Lolium perenne HOM05M000004 ORTHO05M002970 5.3e-65 252.3 376 45.2
V3.Lp_chr4_0G28606 Lolium perenne HOM05M000004 ORTHO05M000008 1.7e-63 247.3 570 38.8
V3.Lp_chr6_0G16364 Lolium perenne HOM05M000004 ORTHO05M002970 1.7e-63 247.3 535 40.4
V3.Lp_chr4_0G11178 Lolium perenne HOM05M000004 ORTHO05M002970 1.9e-62 243.8 630 37.0
V3.Lp_chr2_0G23348 Lolium perenne HOM05M000004 ORTHO05M002970 2.4e-62 243.4 468 40.2
V3.Lp_chr3_0G4434 Lolium perenne HOM05M000004 ORTHO05M002970 5.1e-52 209.1 521 37.8
V3.Lp_chr2_0G24394 Lolium perenne HOM05M000004 ORTHO05M002970 2.7e-45 186.8 591 33.0
Bradi4g11253 Brachypodium distachyon HOM05M000004 ORTHO05M002970 1.3e-42 177.9 512 30.9
V3.Lp_chr2_0G11918 Lolium perenne HOM05M000004 ORTHO05M000008 2.0e-40 170.6 562 31.9
V3.Lp_chr7_0.1G11034 Lolium perenne HOM05M000004 ORTHO05M002970 2.5e-38 163.7 473 37.2
V3.Lp_chr4_0G28488 Lolium perenne HOM05M000004 ORTHO05M002970 2.1e-37 160.6 588 33.3
V3.Lp_chr6_0G14822 Lolium perenne HOM05M000004 ORTHO05M002970 2.1e-37 160.6 583 32.9
V3.Lp_chr4_0G29118 Lolium perenne HOM05M000004 ORTHO05M002970 6.1e-37 159.1 588 33.5
V3.Lp_chr5_0G186 Lolium perenne HOM05M000004 ORTHO05M002970 6.1e-37 159.1 609 29.7
TRIDC7BG041150 Triticum dicoccoides HOM05M000004 ORTHO05M002970 1.8e-36 157.5 288 38.5
TraesCS7B03G0691100 Triticum aestivum HOM05M000004 ORTHO05M002970 2.3e-36 157.1 288 38.5
AET7Gv20862700 Aegilops tauschii HOM05M000004 ORTHO05M002970 2.5e-35 153.7 282 38.7
TraesCS7D03G0818600 Triticum aestivum HOM05M000004 ORTHO05M002970 2.5e-35 153.7 282 38.7
V3.Lp_chr1_0G8886 Lolium perenne HOM05M000004 ORTHO05M000008 4.1e-33 146.4 585 30.9
Bradi4g34877 Brachypodium distachyon HOM05M000004 ORTHO05M002970 5.3e-33 146.0 231 35.5
V3.Lp_chr4_0G22060 Lolium perenne HOM05M000004 ORTHO05M000008 3.8e-31 139.8 173 42.2
Bradi5g04800 Brachypodium distachyon HOM05M000004 ORTHO05M002970 1.4e-30 137.9 512 30.1
V3.Lp_chr4_0G25892 Lolium perenne HOM05M000004 ORTHO05M000008 1.9e-30 137.5 618 26.7
V3.Lp_chr4_0G18494 Lolium perenne HOM05M000004 ORTHO05M002970 2.5e-30 137.1 474 33.3
V3.Lp_chr4_0G2794 Lolium perenne HOM05M000004 ORTHO05M002970 3.2e-30 136.7 600 28.2
V3.Lp_chr4_0G2780 Lolium perenne HOM05M000004 ORTHO05M000008 2.3e-28 130.6 561 31.0
V3.Lp_chr6_0G11644 Lolium perenne HOM05M000004 ORTHO05M002970 6.7e-28 129.0 180 42.2
V3.Lp_chr4_0G13566 Lolium perenne HOM05M000004 ORTHO05M002970 2.5e-27 127.1 595 30.8
V3.Lp_chr1_0G9608 Lolium perenne HOM05M000004 ORTHO05M002970 1.3e-26 124.8 185 38.4
V3.Lp_chr4_0G29624 Lolium perenne HOM05M000004 ORTHO05M002970 2.8e-26 123.6 615 26.0
V3.Lp_chr6_0G15000 Lolium perenne HOM05M000004 ORTHO05M000008 2.8e-26 123.6 628 30.4
V3.Lp_chr2_0G11170 Lolium perenne HOM05M000004 ORTHO05M000008 3.7e-26 123.2 580 30.3
V3.Lp_chr4_0G22996 Lolium perenne HOM05M000004 ORTHO05M000008 3.7e-26 123.2 585 29.1
V3.Lp_chr6_0G316 Lolium perenne HOM05M000004 ORTHO05M002970 8.2e-26 122.1 537 28.1
V3.Lp_chr6_0G15240 Lolium perenne HOM05M000004 ORTHO05M000008 1.4e-25 121.3 619 27.3
V3.Lp_chr2_0G934 Lolium perenne HOM05M000004 ORTHO05M002970 2.4e-25 120.6 619 30.2
V3.Lp_chr4_0G14342 Lolium perenne HOM05M000004 ORTHO05M002970 1.2e-24 118.2 562 27.4
V3.Lp_chr3_0G22520 Lolium perenne HOM05M000004 ORTHO05M000008 3.4e-24 116.7 618 27.0
V3.Lp_chr4_0G3156 Lolium perenne HOM05M000004 ORTHO05M002970 4.5e-24 116.3 581 29.1
V3.Lp_chr3_0G18170 Lolium perenne HOM05M000004 ORTHO05M000008 5.9e-24 115.9 580 28.4
V3.Lp_chr4_0G10850 Lolium perenne HOM05M000004 ORTHO05M000008 1.3e-23 114.8 185 36.8
V3.Lp_scaffold_636G2 Lolium perenne HOM05M000004 ORTHO05M000008 1.7e-23 114.4 591 27.4
V3.Lp_chr6_0G2492 Lolium perenne HOM05M000004 ORTHO05M002970 2.2e-23 114.0 615 27.3
V3.Lp_chr1_0G11750 Lolium perenne HOM05M000004 ORTHO05M002970 2.9e-23 113.6 574 28.4
V3.Lp_chr6_0G3950 Lolium perenne HOM05M000004 ORTHO05M002970 6.5e-23 112.5 236 33.5
V3.Lp_chr4_0G144 Lolium perenne HOM05M000004 ORTHO05M002970 5.5e-22 109.4 552 29.9
V3.Lp_chr4_0G18016 Lolium perenne HOM05M000004 ORTHO05M000008 9.4e-22 108.6 611 28.3
V3.Lp_chr4_0G26808 Lolium perenne HOM05M000004 ORTHO05M000008 9.4e-22 108.6 611 28.3
Zm00001eb419920 Zea mays B73 HOM05M019234 ORTHO05M002970 1.6e-21 107.8 200 31.5
V3.Lp_chr5_0G3876 Lolium perenne HOM05M000004 ORTHO05M002970 3.6e-21 106.7 605 29.4
V3.Lp_chr2_0G21546 Lolium perenne HOM05M000004 ORTHO05M002970 1.0e-20 105.1 625 30.1
V3.Lp_chr1_0G8582 Lolium perenne HOM05M000004 ORTHO05M002970 3.0e-20 103.6 592 29.2
V3.Lp_chr5_0G13592 Lolium perenne HOM05M000004 ORTHO05M000008 6.7e-20 102.4 140 41.4
Zm00001eb396570 Zea mays B73 HOM05M008008 ORTHO05M002970 8.8e-20 102.1 263 28.1
Pahal.3G362800 Panicum hallii HOM05M008008 ORTHO05M002970 2.0e-19 100.9 151 35.1
V3.Lp_chr5_0G14644 Lolium perenne HOM05M000004 ORTHO05M002970 4.4e-19 99.8 572 28.7
V3.Lp_scaffold_5265G2 Lolium perenne HOM05M000004 ORTHO05M002970 4.4e-19 99.8 586 26.8
EJB05_30676 Eragrostis curvula HOM05M008008 ORTHO05M002970 7.4e-19 99.0 201 29.9
Sobic.003G154450 Sorghum bicolor HOM05M008008 ORTHO05M002970 7.4e-19 99.0 218 31.7
EJB05_25840 Eragrostis curvula HOM05M008008 ORTHO05M002970 3.7e-18 96.7 147 32.7
AET6Gv20443500 Aegilops tauschii HOM05M011174 ORTHO05M002970 4.8e-18 96.3 187 30.5
V3.Lp_chr4_0G6892 Lolium perenne HOM05M000004 ORTHO05M000008 6.3e-18 95.9 542 26.6
V3.Lp_chr6_0G1354 Lolium perenne HOM05M000004 ORTHO05M000008 6.3e-18 95.9 480 28.8
V3.Lp_chr2_0G13432 Lolium perenne HOM05M000004 ORTHO05M002970 3.1e-17 93.6 575 28.7
GWHGASIY018794 Secale cereale HOM05M011174 ORTHO05M002970 5.3e-17 92.8 188 32.4
EJB05_37519 Eragrostis curvula HOM05M008008 ORTHO05M002970 5.9e-16 89.4 187 28.3
Sspon.08G0026270-1C Saccharum spontaneum HOM05M000004 ORTHO05M000008 2.2e-15 87.4 156 35.9
V3.Lp_chr1_0G4774 Lolium perenne HOM05M000004 ORTHO05M000008 1.1e-14 85.1 564 27.3
V3.Lp_chr3_0G22012 Lolium perenne HOM05M000004 ORTHO05M002970 4.2e-14 83.2 594 26.8
EJB05_35534 Eragrostis curvula HOM05M008008 ORTHO05M002970 2.1e-13 80.9 175 25.7
Pahal.5G320300 Panicum hallii HOM05M008008 ORTHO05M002970 2.1e-13 80.9 168 28.0
Zm00001eb261750 Zea mays B73 HOM05M007276 ORTHO05M000841 2.1e-13 80.9 191 28.8
Zm00001eb416460 Zea mays B73 HOM05M007276 ORTHO05M000841 4.7e-13 79.7 187 28.3
GWHGAZTO008303 Oryza alta HOM05M008008 ORTHO05M002970 1.4e-12 78.2 203 26.1
Sevir.1G194400 Setaria viridis HOM05M011545 ORTHO05M002970 1.4e-12 78.2 183 24.6
Seita.1G190400 Setaria italica HOM05M011545 ORTHO05M002970 2.3e-12 77.4 183 24.6
V3.Lp_chr4_0G28912 Lolium perenne HOM05M000004 ORTHO05M000008 4.0e-12 76.6 123 36.6
Zm00001eb098050 Zea mays B73 HOM05M008008 ORTHO05M002970 6.7e-12 75.9 127 29.9
EJB05_56418 Eragrostis curvula HOM05M007276 ORTHO05M000841 1.5e-11 74.7 187 26.2
OsR498G0917816300.01 Oryza sativa ssp. indica HOM05M028621 ORTHO05M002970 2.6e-11 73.9 199 27.1
V3.Lp_chr1_0G14782 Lolium perenne HOM05M000886 ORTHO05M001179 4.4e-11 73.2 188 27.1
Zm00001eb050450 Zea mays B73 HOM05M007276 ORTHO05M000841 4.4e-11 73.2 193 30.6
Zm00001eb112050 Zea mays B73 HOM05M007276 ORTHO05M000841 4.4e-11 73.2 193 30.6
V3.Lp_chr1_0G18420 Lolium perenne HOM05M000004 ORTHO05M000008 5.7e-11 72.8 230 33.9
Sobic.002G120501 Sorghum bicolor HOM05M046239 ORTHO05M002970 5.7e-11 72.8 190 28.4
Zm00001eb091020 Zea mays B73 HOM05M007276 ORTHO05M000841 1.3e-10 71.6 192 29.2
V3.Lp_chr5_0G18280 Lolium perenne HOM05M000004 ORTHO05M000008 2.8e-10 70.5 192 37.0
Os04g0220501 Oryza sativa ssp. japonica HOM05M002072 ORTHO05M003460 2.8e-10 70.5 134 30.6
V3.Lp_chr4_0G28376 Lolium perenne HOM05M000002 ORTHO05M000002 8.2e-10 68.9 107 43.0
EJB05_55948 Eragrostis curvula HOM05M001982 ORTHO05M000841 1.4e-09 68.2 147 29.9
EJB05_25770 Eragrostis curvula HOM05M001982 ORTHO05M000841 1.8e-09 67.8 147 29.9
OsR498G0101326100.01 Oryza sativa ssp. indica HOM05M007276 ORTHO05M000841 2.4e-09 67.4 187 25.1
AET2Gv20221400 Aegilops tauschii HOM05M000004 ORTHO05M002970 3.1e-09 67.0 99 31.3
EJB05_57668 Eragrostis curvula HOM05M001982 ORTHO05M000841 3.1e-09 67.0 189 26.5
Horvu_MOREX_1H01G042900 Hordeum vulgare HOM05M011174 ORTHO05M002970 3.1e-09 67.0 112 32.1
OB05G18310 Oryza brachyantha HOM05M000004 ORTHO05M002970 3.1e-09 67.0 148 26.4
Sspon.02G0015950-1A Saccharum spontaneum HOM05M004461 ORTHO05M005655 5.3e-09 66.2 192 25.5
V3.Lp_chr2_0G18922 Lolium perenne HOM05M000004 ORTHO05M000008 7.0e-09 65.9 185 27.0
V3.Lp_chr4_0G16962 Lolium perenne HOM05M000004 ORTHO05M000008 7.0e-09 65.9 240 34.6
V3.Lp_chr2_0G17730 Lolium perenne HOM05M000004 ORTHO05M000008 9.1e-09 65.5 520 28.1
EJB05_42958 Eragrostis curvula HOM05M001982 ORTHO05M000841 1.2e-08 65.1 189 26.5
Misin05G185200 Miscanthus sinensis HOM05M011545 ORTHO05M002970 1.2e-08 65.1 521 25.0
EJB05_26904 Eragrostis curvula HOM05M002344 ORTHO05M002425 2.0e-08 64.3 185 21.1
AET5Gv20147500 Aegilops tauschii HOM05M011174 ORTHO05M002970 4.5e-08 63.2 107 35.5
EJB05_14233 Eragrostis curvula HOM05M021401 ORTHO05M000841 7.7e-08 62.4 260 21.9
Zm00001eb250840 Zea mays B73 HOM05M001982 ORTHO05M000841 7.7e-08 62.4 181 28.7
Misin13G072400 Miscanthus sinensis HOM05M011545 ORTHO05M002970 1.3e-07 61.6 182 25.8
Misin09G105600 Miscanthus sinensis HOM05M011545 ORTHO05M002970 5.0e-07 59.7 143 26.6
Zm00001eb261780 Zea mays B73 HOM05M001982 ORTHO05M022939 6.5e-07 59.3 181 27.6
Bradi1g77316 Brachypodium distachyon HOM05M001982 ORTHO05M000841 8.5e-07 58.9 195 25.1
GWHGAZTO022687 Oryza alta HOM05M001982 ORTHO05M000841 8.5e-07 58.9 125 28.8
Zm00001eb029240 Zea mays B73 HOM05M001982 ORTHO05M000841 8.5e-07 58.9 178 28.7
Zm00001eb158410 Zea mays B73 HOM05M001982 ORTHO05M000841 8.5e-07 58.9 178 28.7
Bradi1g55889 Brachypodium distachyon HOM05M001982 ORTHO05M000841 1.1e-06 58.5 182 25.8
V3.Lp_chr2_0G15424 Lolium perenne HOM05M000004 ORTHO05M008196 1.5e-06 58.2 407 26.3
Pahal.8G114000 Panicum hallii HOM05M008008 ORTHO05M002970 1.5e-06 58.2 107 33.6
GWHGAZTO013407 Oryza alta HOM05M007276 ORTHO05M000841 1.9e-06 57.8 140 25.0
GWHGAZTO033430 Oryza alta HOM05M007276 ORTHO05M000841 2.5e-06 57.4 164 24.4
AET5Gv20795300 Aegilops tauschii HOM05M011174 ORTHO05M002970 3.2e-06 57.0 89 34.8
V3.Lp_chr4_0G21270 Lolium perenne HOM05M000004 ORTHO05M002970 4.2e-06 56.6 534 25.8
Sevir.3G254900 Setaria viridis HOM05M011545 ORTHO05M002970 4.2e-06 56.6 125 28.0
V3.Lp_chr1_0G440 Lolium perenne HOM05M001982 ORTHO05M000841 5.5e-06 56.2 168 23.2
Zm00001eb408840 Zea mays B73 HOM05M001982 ORTHO05M000841 7.2e-06 55.8 181 27.1


User provided reference genes

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