Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc11g021080.3 Solanum lycopersicum HOM05M011362 ORTHO05M019173 2.5e-92 341.3 164 100.0
Solyc01g017080.2 Solanum lycopersicum HOM05M011362 ORTHO05M010566 2.1e-38 162.2 108 75.0
Solyc02g011920.2 Solanum lycopersicum HOM05M001177 ORTHO05M001237 3.3e-36 154.8 259 40.5
Solyc11g018700.3 Solanum lycopersicum HOM05M011362 ORTHO05M010566 1.6e-22 109.4 55 90.9
Solyc01g017150.1 Solanum lycopersicum HOM05M011362 ORTHO05M019173 1.3e-19 99.8 55 81.8
Solyc00g500038.1 Solanum lycopersicum HOM05M011362 ORTHO05M010566 4.8e-19 97.8 48 87.5
Solyc00g500045.1 Solanum lycopersicum HOM05M011362 ORTHO05M010566 4.8e-19 97.8 48 87.5
Solyc00g500082.1 Solanum lycopersicum HOM05M011362 ORTHO05M010566 4.8e-19 97.8 48 87.5
Solyc00g500127.1 Solanum lycopersicum HOM05M011362 ORTHO05M010566 4.8e-19 97.8 48 87.5
Solyc00g500197.1 Solanum lycopersicum HOM05M011362 ORTHO05M010566 4.8e-19 97.8 48 87.5
Solyc00g500300.1 Solanum lycopersicum HOM05M011362 ORTHO05M010566 4.8e-19 97.8 48 87.5
Solyc00g500326.1 Solanum lycopersicum HOM05M011362 ORTHO05M010566 4.8e-19 97.8 48 87.5
Solyc00g500037.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 2.4e-18 95.5 171 38.0
Solyc00g500046.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 2.4e-18 95.5 171 38.0
Solyc00g500081.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 2.4e-18 95.5 171 38.0
Solyc00g500128.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 2.4e-18 95.5 171 38.0
Solyc00g500198.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 2.4e-18 95.5 171 38.0
Solyc00g500327.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 2.4e-18 95.5 171 38.0
Solyc03g058240.1 Solanum lycopersicum HOM05M011362 ORTHO05M010566 1.6e-14 82.8 54 68.5
Solyc00g500304.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 3.5e-14 81.6 170 35.3
Solyc11g063577.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 3.5e-14 81.6 170 35.3
Solyc00g500239.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.3e-13 79.7 169 34.9
Potri.019G028450 Populus trichocarpa HOM05M011362 ORTHO05M010566 5.1e-13 77.8 67 61.2
ATCG00870 Arabidopsis thaliana HOM05M028898 ORTHO05M019173 8.7e-13 77.0 50 72.0
ATCG01270 Arabidopsis thaliana HOM05M028898 ORTHO05M019173 8.7e-13 77.0 50 72.0
Potri.013G143400 Populus trichocarpa HOM05M001177 ORTHO05M001237 1.9e-12 75.9 177 33.3
Solyc11g062050.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 2.5e-12 75.5 36 94.4
DDU581G0028 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 4.8e-11 71.2 125 38.4
DDU643G0124 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 4.8e-11 71.2 125 38.4
ATCG00860 Arabidopsis thaliana HOM05M001177 ORTHO05M001237 8.1e-11 70.5 177 32.2
ATCG01280 Arabidopsis thaliana HOM05M001177 ORTHO05M001237 8.1e-11 70.5 177 32.2
Solyc01g017280.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 8.1e-11 70.5 129 40.3
Solyc00g500147.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.1e-10 70.1 171 32.2
ATR0258G003 Amborella trichopoda HOM05M001177 ORTHO05M001237 3.1e-10 68.6 179 31.3
Solyc09g061465.1 Solanum lycopersicum HOM05M001177 ORTHO05M001237 3.1e-10 68.6 47 70.2
Aco029013 Ananas comosus HOM05M001177 ORTHO05M001237 4.0e-10 68.2 175 32.0
DDU125G0004 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU125G0008 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU125G0009 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU125G0023 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU125G0032 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU197G0012 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU524G0310 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU581G0024 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU643G0020 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU643G0113 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU688G0006 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU688G0014 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU747G0007 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
DDU747G0017 Dioscorea dumetorum HOM05M001177 ORTHO05M001237 2.0e-09 65.9 177 31.1
Solyc04g039770.3 Solanum lycopersicum HOM05M001177 ORTHO05M001237 4.5e-09 64.7 47 66.0
Aco025943 Ananas comosus HOM05M001177 ORTHO05M001237 9.9e-09 63.5 178 30.9
Solyc08g029400.3 Solanum lycopersicum HOM05M001177 ORTHO05M001237 1.7e-08 62.8 47 61.7
Asa5G00234 Allium sativum HOM05M001177 ORTHO05M001237 7.1e-07 57.4 47 61.7
Asa0G00964 Allium sativum HOM05M001177 ORTHO05M001237 9.3e-07 57.0 30 83.3
Asa0G01433 Allium sativum HOM05M001177 ORTHO05M001237 9.3e-07 57.0 30 83.3
Asa0G03565 Allium sativum HOM05M001177 ORTHO05M001237 9.3e-07 57.0 30 83.3
Asa0G05398 Allium sativum HOM05M001177 ORTHO05M001237 9.3e-07 57.0 30 83.3
Asa2G01951 Allium sativum HOM05M001177 ORTHO05M001237 9.3e-07 57.0 30 83.3
Asa3G01531 Allium sativum HOM05M001177 ORTHO05M001237 9.3e-07 57.0 30 83.3
Asa3G05072 Allium sativum HOM05M001177 ORTHO05M001237 9.3e-07 57.0 30 83.3
Asa8G05533 Allium sativum HOM05M001177 ORTHO05M001237 9.3e-07 57.0 30 83.3
Potri.019G028400 Populus trichocarpa HOM05M001177 ORTHO05M001237 9.3e-07 57.0 39 71.8
Solyc08g048230.2 Solanum lycopersicum HOM05M001177 ORTHO05M001237 9.3e-07 57.0 31 77.4
Aco028538 Ananas comosus HOM05M001177 ORTHO05M001237 2.7e-06 55.5 34 76.5
Aco020231 Ananas comosus HOM05M001177 ORTHO05M001237 4.6e-06 54.7 36 72.2
Glyma.16G065300 Glycine max HOM05M001177 ORTHO05M001237 6.0e-06 54.3 30 83.3


User provided reference genes

Program Settings