Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc07g006040.3 Solanum lycopersicum HOM05M007928 ORTHO05M010063 1.0e-61 239.2 125 100.0
AT4G30845 Arabidopsis thaliana HOM05M007928 ORTHO05M010063 1.6e-19 99.0 82 57.3
DDU791G0031 Dioscorea dumetorum HOM05M000001 ORTHO05M000003 1.4e-18 95.9 96 47.9
DDU801G0302 Dioscorea dumetorum HOM05M000001 ORTHO05M000003 1.4e-18 95.9 96 47.9
Glyma.17G071000 Glycine max HOM05M007928 ORTHO05M010063 1.7e-16 89.0 89 49.4
Aco003853 Ananas comosus HOM05M007928 ORTHO05M010063 2.9e-16 88.2 70 57.1
p5.00_sc00215_p0013 Elaeis guineensis HOM05M007928 ORTHO05M010063 4.9e-16 87.4 94 48.9
evm.TU.AsparagusV1_08.1401.V1.1 Asparagus officinalis HOM05M007928 ORTHO05M010063 2.4e-15 85.1 95 47.4
Potri.006G180200 Populus trichocarpa HOM05M007928 ORTHO05M010063 9.2e-15 83.2 146 36.3
Sspon.01G0035880-1B Saccharum spontaneum HOM05M007928 ORTHO05M010063 2.7e-14 81.6 61 60.7
Sspon.01G0035880-1P Saccharum spontaneum HOM05M007928 ORTHO05M010063 2.7e-14 81.6 61 60.7
CDE04G0159 Ceratophyllum demersum HOM05M007928 ORTHO05M010063 3.5e-14 81.3 88 46.6
V3.Lp_chr6_0G9074 Lolium perenne HOM05M007928 ORTHO05M010063 3.5e-14 81.3 88 46.6
Zjn_sc00003.1.g08440.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M007928 ORTHO05M010063 3.5e-14 81.3 93 46.2
Ot_Chr6_g02056 Oropetium thomaeum HOM05M007928 ORTHO05M010063 4.6e-14 80.9 71 53.5
GWHGAZTO022742 Oryza alta HOM05M007928 ORTHO05M010063 4.6e-14 80.9 62 56.5
Dexi9B01G0042600 Digitaria exilis HOM05M007928 ORTHO05M010063 6.0e-14 80.5 82 48.8
OsKitaake03g085300 Oryza sativa Kitaake HOM05M007928 ORTHO05M010063 6.0e-14 80.5 62 58.1
Os03g0210900 Oryza sativa ssp. japonica HOM05M007928 ORTHO05M010063 6.0e-14 80.5 62 58.1
Dexi9A01G0043340 Digitaria exilis HOM05M007928 ORTHO05M010063 7.8e-14 80.1 82 48.8
Misin01G441400 Miscanthus sinensis HOM05M007928 ORTHO05M010063 1.0e-13 79.7 61 60.7
GWHGAZTO001124 Oryza alta HOM05M007928 ORTHO05M010063 1.0e-13 79.7 58 60.3
Sobic.001G460700 Sorghum bicolor HOM05M007928 ORTHO05M010063 1.0e-13 79.7 61 59.0
ATR0111G019 Amborella trichopoda HOM05M007928 ORTHO05M010063 3.9e-13 77.8 85 50.6
PH02Gene19795 Phyllostachys edulis HOM05M007928 ORTHO05M010063 3.9e-13 77.8 51 66.7
Bradi1g70380 Brachypodium distachyon HOM05M007928 ORTHO05M010063 5.1e-13 77.4 67 56.7
Pahal.9G558100 Panicum hallii HOM05M007928 ORTHO05M010063 5.1e-13 77.4 61 57.4
Seita.9G494900 Setaria italica HOM05M007928 ORTHO05M010063 6.6e-13 77.0 58 62.1
GWHGAORA026692 Cenchrus purpureus HOM05M007928 ORTHO05M010063 8.6e-13 76.6 60 60.0
Sevir.9G499000 Setaria viridis HOM05M007928 ORTHO05M010063 8.6e-13 76.6 58 60.3
EJB05_07591 Eragrostis curvula HOM05M007928 ORTHO05M010063 1.1e-12 76.3 67 53.7
Asa4G03127 Allium sativum HOM05M007928 ORTHO05M010063 1.5e-12 75.9 73 45.2
Zosma04g20390 Zostera marina HOM05M007928 ORTHO05M010063 2.5e-12 75.1 95 46.3
TraesCS4B03G0678500 Triticum aestivum HOM05M007928 ORTHO05M010063 3.3e-12 74.7 61 55.7
TRITD4Av1G019700 Triticum turgidum HOM05M007928 ORTHO05M010063 7.3e-12 73.6 90 45.6
HPP92_006698 Vanilla planifolia HOM05M007928 ORTHO05M010063 9.6e-12 73.2 61 52.5
Horvu_MOREX_4H01G391300 Hordeum vulgare HOM05M007928 ORTHO05M010063 1.6e-11 72.4 46 69.6
TraesCS4D03G0603500 Triticum aestivum HOM05M007928 ORTHO05M010063 1.6e-11 72.4 90 44.4
GWHGASIY038089 Secale cereale HOM05M007928 ORTHO05M010063 2.1e-11 72.0 61 54.1
TRIDC4BG043750 Triticum dicoccoides HOM05M007928 ORTHO05M010063 2.1e-11 72.0 41 75.6
Zm00001eb400430 Zea mays B73 HOM05M007928 ORTHO05M010063 2.1e-11 72.0 89 43.8
Zm00007a00001950 Zea mays B104 HOM05M007928 ORTHO05M010063 2.1e-11 72.0 89 43.8
TRIDC4AG007310 Triticum dicoccoides HOM05M007928 ORTHO05M010063 3.6e-11 71.2 41 75.6
TraesCS4A03G0103800 Triticum aestivum HOM05M007928 ORTHO05M010063 4.7e-11 70.9 90 44.4
Ma04_g24330 Musa acuminata HOM05M007928 ORTHO05M010063 1.8e-10 68.9 74 48.6
Pp3c17_8590 Physcomitrium patens HOM05M007928 ORTHO05M010063 2.6e-09 65.1 58 50.0
CBR_g10976 Chara braunii HOM05M007928 ORTHO05M010063 9.9e-09 63.2 57 47.4
Mapoly0004s0134 Marchantia polymorpha HOM05M007928 ORTHO05M010063 1.3e-08 62.8 104 30.8
CALSI_Maker00017520 Calamus simplicifolius HOM05M007928 ORTHO05M010063 6.4e-08 60.5 42 59.5
OB03G18380 Oryza brachyantha HOM05M007928 ORTHO05M010063 2.7e-06 55.1 35 65.7


User provided reference genes

Program Settings