Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Solyc04g049130.4 Solanum lycopersicum HOM05M005988 ORTHO05M007071 1.9e-226 788.1 401 100.0
Potri.004G090400 Populus trichocarpa HOM05M005988 ORTHO05M007071 8.0e-153 543.5 410 69.3
Glyma.01G077300 Glycine max HOM05M005988 ORTHO05M007071 6.3e-150 533.9 403 70.7
Glyma.11G176309 Glycine max HOM05M005988 ORTHO05M007071 1.2e-148 529.6 407 71.0
ATR0776G070 Amborella trichopoda HOM05M005988 ORTHO05M007071 3.6e-145 518.1 411 67.4
CDE06G1324 Ceratophyllum demersum HOM05M005988 ORTHO05M007071 4.4e-143 511.1 330 75.5
p5.00_sc00182_p0086 Elaeis guineensis HOM05M005988 ORTHO05M007071 1.1e-141 506.5 408 65.4
Zosma04g24110 Zostera marina HOM05M005988 ORTHO05M007071 5.4e-141 504.2 402 63.7
AT5G03900 Arabidopsis thaliana HOM05M005988 ORTHO05M007071 9.2e-141 503.4 409 67.2
Ma10_g15700 Musa acuminata HOM05M005988 ORTHO05M007071 6.0e-140 500.7 355 71.8
Asa6G01160 Allium sativum HOM05M005988 ORTHO05M007071 6.6e-139 497.3 403 63.5
Spipo0G0003700 Spirodela polyrhiza HOM05M005988 ORTHO05M007071 2.8e-137 491.9 315 75.9
Aco007799 Ananas comosus HOM05M005988 ORTHO05M007071 1.4e-136 489.6 414 62.1
DDU739G0618 Dioscorea dumetorum HOM05M005988 ORTHO05M007071 2.1e-132 475.7 405 63.7
CDE08G0731 Ceratophyllum demersum HOM05M005988 ORTHO05M007071 3.7e-126 454.9 294 75.5
GWHGASIY031917 Secale cereale HOM05M005988 ORTHO05M007071 6.4e-126 454.1 337 67.7
TraesCS6B03G0621200 Triticum aestivum HOM05M005988 ORTHO05M007071 6.4e-126 454.1 337 68.2
TRIDC6BG035680 Triticum dicoccoides HOM05M005988 ORTHO05M007071 6.4e-126 454.1 337 68.2
TraesCS6D03G0447900 Triticum aestivum HOM05M005988 ORTHO05M007071 8.3e-126 453.8 337 68.0
TraesCS6A03G0532600 Triticum aestivum HOM05M005988 ORTHO05M007071 1.9e-125 452.6 337 68.0
TRIDC6AG030310 Triticum dicoccoides HOM05M005988 ORTHO05M007071 3.2e-125 451.8 337 67.7
AET6Gv20531900 Aegilops tauschii HOM05M005988 ORTHO05M007071 2.7e-124 448.7 337 67.1
Horvu_MOREX_6H01G292500 Hordeum vulgare HOM05M005988 ORTHO05M007071 1.3e-123 446.4 337 66.8
GWHGAORA023879 Cenchrus purpureus HOM05M005988 ORTHO05M007071 5.1e-123 444.5 335 67.2
Pahal.1G254900 Panicum hallii HOM05M005988 ORTHO05M007071 4.3e-122 441.4 335 66.9
GWHGAORA059314 Cenchrus purpureus HOM05M005988 ORTHO05M007071 5.6e-122 441.0 335 66.6
Seita.1G180800 Setaria italica HOM05M005988 ORTHO05M007071 1.6e-121 439.5 335 66.9
Sevir.1G183800 Setaria viridis HOM05M005988 ORTHO05M007071 1.6e-121 439.5 335 66.9
PH02Gene47405 Phyllostachys edulis HOM05M005988 ORTHO05M007071 8.9e-120 433.7 335 65.4
Bradi3g44920 Brachypodium distachyon HOM05M005988 ORTHO05M007071 1.5e-119 433.0 394 59.4
Sobic.004G165700 Sorghum bicolor HOM05M005988 ORTHO05M007071 1.5e-119 433.0 335 65.1
Zm00001eb242770 Zea mays B73 HOM05M005988 ORTHO05M007071 2.0e-119 432.6 340 64.4
OsKitaake02g195000 Oryza sativa Kitaake HOM05M005988 ORTHO05M007071 2.9e-118 428.7 335 64.5
OsR498G0203998400.01 Oryza sativa ssp. indica HOM05M005988 ORTHO05M007071 2.9e-118 428.7 335 64.5
Os02g0533000 Oryza sativa ssp. japonica HOM05M005988 ORTHO05M007071 2.9e-118 428.7 335 64.5
GWHGAZTO018829 Oryza alta HOM05M005988 ORTHO05M007071 1.1e-117 426.8 335 63.9
Ot_Chr1_g11352 Oropetium thomaeum HOM05M005988 ORTHO05M007071 1.9e-117 426.0 384 58.1
GWHGAZTO070454 Oryza alta HOM05M005988 ORTHO05M007071 1.6e-116 422.9 333 64.3
V3.Lp_chr5_0G5914 Lolium perenne HOM05M005988 ORTHO05M007071 5.1e-115 417.9 335 63.6
TRITD6Bv1G102610 Triticum turgidum HOM05M005988 ORTHO05M007071 6.6e-115 417.5 337 64.1
TRITD6Av1G113780 Triticum turgidum HOM05M005988 ORTHO05M007071 1.9e-114 416.0 337 63.8
Sspon.04G0010870-2B Saccharum spontaneum HOM05M005988 ORTHO05M007071 9.6e-114 413.7 366 58.5
HPP92_005468 Vanilla planifolia HOM05M005988 ORTHO05M007071 1.8e-112 409.5 384 59.4
CALSI_Maker00027573 Calamus simplicifolius HOM05M005988 ORTHO05M007071 3.1e-112 408.7 407 56.5
Mapoly0014s0147 Marchantia polymorpha HOM05M005988 ORTHO05M007071 3.4e-111 405.2 401 55.6
Pp3c24_800 Physcomitrium patens HOM05M005988 ORTHO05M007071 5.8e-111 404.4 343 63.6
PH02Gene26438 Phyllostachys edulis HOM05M005988 ORTHO05M007071 4.9e-110 401.4 316 66.1
Zm00007a00028550 Zea mays B104 HOM05M005988 ORTHO05M007071 5.4e-109 397.9 315 64.1
AagrBONN_evm.TU.Sc2ySwM_117.4009 Anthoceros agrestis HOM05M005988 ORTHO05M007071 4.3e-106 388.3 336 58.9
EJB05_21467 Eragrostis curvula HOM05M005988 ORTHO05M007071 7.6e-103 377.5 348 56.9
evm.TU.AsparagusV1_02.797.V1.1 Asparagus officinalis HOM05M005988 ORTHO05M007071 9.3e-101 370.5 279 67.0
Dexi1B01G0014820 Digitaria exilis HOM05M005988 ORTHO05M007071 6.0e-100 367.9 327 60.6
CBR_g12587 Chara braunii HOM05M005988 ORTHO05M007071 1.0e-94 350.5 343 52.8
OB02G26900 Oryza brachyantha HOM05M005988 ORTHO05M007071 7.9e-92 340.9 273 62.6
SMO137G0276 Selaginella moellendorffii HOM05M005988 ORTHO05M007071 1.0e-86 323.9 336 53.6
Sspon.04G0010870-1A Saccharum spontaneum HOM05M005988 ORTHO05M007071 5.5e-85 318.2 333 50.8
Misin07G350900 Miscanthus sinensis HOM05M005988 ORTHO05M007071 2.6e-79 299.3 248 60.9
MCO08G276 Micromonas commoda HOM05M005988 ORTHO05M007071 1.4e-77 293.5 322 50.6
PRCOL_00000272 Prasinoderma coloniale HOM05M005988 ORTHO05M007071 2.2e-73 279.6 325 47.4
Cre07.g338350 Chlamydomonas reinhardtii HOM05M005988 ORTHO05M007071 2.7e-68 262.7 359 42.3
SEGI_29241 Sequoiadendron giganteum HOM05M005988 ORTHO05M007071 2.5e-53 213.0 158 67.1
Zjn_sc00020.1.g01830.1.sm.mkhc Zoysia japonica ssp. nagirizaki HOM05M005988 ORTHO05M007071 3.0e-51 206.1 388 36.9
MisinT517100 Miscanthus sinensis HOM05M005988 ORTHO05M007071 1.5e-50 203.8 171 62.6
Asa8G05165 Allium sativum HOM05M005988 ORTHO05M007071 1.4e-27 127.5 128 54.7
Asa7G02606 Allium sativum HOM05M005988 ORTHO05M007071 4.9e-25 119.0 128 47.7
SEGI_03177 Sequoiadendron giganteum HOM05M005988 ORTHO05M007071 7.0e-24 115.2 84 63.1
evm.TU.AsparagusV1_04.2035.V1.1 Asparagus officinalis HOM05M005988 ORTHO05M007071 5.0e-22 109.0 69 79.7
evm.TU.AsparagusV1_07.2611.V1.1 Asparagus officinalis HOM05M005988 ORTHO05M007071 5.0e-22 109.0 69 79.7
Sspon.04G0010870-3C Saccharum spontaneum HOM05M005988 ORTHO05M007071 2.1e-20 103.6 77 59.7
MCO05G565 Micromonas commoda HOM05M005988 ORTHO05M137400 4.1e-16 89.4 153 34.6
SEGI_11477 Sequoiadendron giganteum HOM05M005988 ORTHO05M007071 1.1e-11 74.7 68 55.9
Asa6G02274 Allium sativum HOM05M005988 ORTHO05M007071 5.2e-11 72.4 53 54.7


User provided reference genes

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